Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0210 ATGTCGGAGAACGGTAATGGCGAGACGGGGATAAGCTATCTTCACGGCGACCTGGACTTGACCATCTTCGAGGCTCGAAACTTGCCCAACATGGATGTCTCTGAGCATTTCCGCCGTTGCGTCACCGCCTGTGGCACTATCAAGTTCCATTCCGCTGGCGACCAGAAGACCCGCCGTCGCCGGAGGATTATCACTAGCGACTCATACGTTACCATCTCGGTGCCGCAGTCTACTGTTGCTCGCACGCGTGTGATAAAGAATACGCCGAACCCTCAGTGGAACGAGCGGTTCAGTATCCCCTTGGCACACCCCGTGGAGTATTTGGAATTTCGAGTCAAAGACGACGACGTATTTGGTGCTCAGCTTGTGGGAACTGTCCATATTCCTGCACAGAGAATTGCTTCCGGTGAGTTTATCGCCGGATGGTCCCCCATTCTTGGTTCTTCCGGTAAGCCTCCCAAGCCAGACACCGCTCTGCGTATAGAAATGAAGTTCATAGCCGTGGAAGAGAACTTCTTGTACCAGCGAGGCATTGCGGCTGATCCGGAGCACAAGGGCGTGAGGCAAACGTATTTTCCTGTGCGGAAGGGAAGCTCGGTGAGGTTGTACCAAGATGCCCATGTTCCTAACGGCATCCTACCTGTGATAAAGCTAGAGGGAGGAGAGGTTTACAAGCATGGAAAGTGTTGGGAGGATATTTGTTATGCCATATCTGAGGCTCATCATATGGTTTATCTTGTGGGTTGGTCAATCTACCACAAAGTAAAGATTGTGAGGGAACCTAGCAGGCCTTTGCCACGAGGTGGGGATTTAACTCTTGGTGAATTGCTCAAATACAAATCTGAAGAAGGGGTGCGAGTTCTCTTGCTGATTTGGGATGATAAGACTTCCCATGACAAGTTGTTCTTCAAGTCGGCTGGAGTAATGCAGACACATGATGAAGAAACCAGGAAATTTTTTAAGCATTCTTCCATTATGTGTGTTCTAGCACCTCGGTATGCTAGCTGCAAGTTGAGTTATATGAAGCAACAAGTTGTTGGAACTGTTTTCACACATCACCAAAAATGTGTCCTTGTGGACACGCAGGCTTTTGGTAATAACCGTAAGATAACTGCTTTTTTAGGAGGCCTTGATCTATGTGATGGTCGCTATGACACACCTGAGCATCGACTTTTTCGTGATCTTGATACTGTATTTTCGGGTGACTTTCACAATCCTACATTTTCAGCTGGAACAAGGGCTCCTAGGCAGCCGTGGCATGATTTGCACTGCAGAATAGATGGACCTGCTGCATATGATGTTCTTCTTAATTTTGAGCAGCGTTGGAGAAAAGCAACAAAATGGAAAGAGTTTGGAATACTTTTCAAAAAGGCTTCCCATTGGCATGATGATGCTTTACTGAAAATAGATCGCATCTCATGGATATTAAGTCCTTCCTTGCCTCGCTCAAAGGATGGTAGCACAACTGTTCCAGGAGATAATCCTTTACTATGGGTCAACAGCGAAGATGATCCTGATAACTGGCACGTTCAGATATTCCGCTCCATTGATTCAGGATCCCTGAAAGGGTTTCCCAAAAGTGTTGATCTTGCTCGGTCTCAGAATCTAACCTGCGCTAAAAATTTAGTAATAGATAAAAGCATTCAAACAGGATACATTCAAGCGATCAGATCTGCTCAACACTTTATCTATATTGAAAACCAATATTTTCTTGGATCATCGTATGCTTGGCCATCTTATAAGGATGCAGGAGCTGATAATCTCATTCCAATGGAACTGGCACTCAAAATTGCTAGTAAAATCAGAGCCAAGGAGAGATTTGCAGTGTATATTGTTTTACCAATGTGGCCTGAGGGTGATCCTAATTCAGCAGCTATGCAAGAAATCCTCTTTTGGCAGAGCCAGACAATGCAAACGATGTATGATGTTGTTGCAAGAGAATTAAAATCAATGCAACTTGTTGATTTGCACCCACAAGATTACCTCAACTTCTATTGCCTTGGTAACCGGGAAGAATTCCATGAAGAAAACTCAAGTTCAAATGGTGCTTCGGTCTGCAGTTCGCATAAACATTGCCGATTTATGATTTATGTGCATGCTAAGGGGATGATTGTTGACGATGAGTATGTTATCGTGGGATCTGCTAATATAAATCAAAGGTCTATGGCTGGCACAAAAGATACTGAGATAGCTATGGGTGCATATCAACCTCATCACACTTGGTTTGCCAGGAAAAGACATCCGTGCGGTCAGATTTATGGTTACAGAATGTCACTGTGGGCAGAGCATCTTGGGATGTTAGAGGCAAATTTTGAAGAACCAGAGAGTTTGGAATGTTTGCGTAAGGTGAATTCCATTGCGGAAGAGAATTGGAGAAGATACTCGTCGGAGGACTTCTCATCATTGCAGGGGCATATTCTGAAGTATCCTGTACAAGTAGATGCTGATGGCAAGGTTTGCCCTTTACCTGAATATGAGACTTTCGTGGATGTTGGCGGCAAAGTAATGGGATCTCATTTCCCTACAATTCCTGATATTCTAACAACATAG 2550 0.4478 MSENGNGETGISYLHGDLDLTIFEARNLPNMDVSEHFRRCVTACGTIKFHSAGDQKTRRRRRIITSDSYVTISVPQSTVARTRVIKNTPNPQWNERFSIPLAHPVEYLEFRVKDDDVFGAQLVGTVHIPAQRIASGEFIAGWSPILGSSGKPPKPDTALRIEMKFIAVEENFLYQRGIAADPEHKGVRQTYFPVRKGSSVRLYQDAHVPNGILPVIKLEGGEVYKHGKCWEDICYAISEAHHMVYLVGWSIYHKVKIVREPSRPLPRGGDLTLGELLKYKSEEGVRVLLLIWDDKTSHDKLFFKSAGVMQTHDEETRKFFKHSSIMCVLAPRYASCKLSYMKQQVVGTVFTHHQKCVLVDTQAFGNNRKITAFLGGLDLCDGRYDTPEHRLFRDLDTVFSGDFHNPTFSAGTRAPRQPWHDLHCRIDGPAAYDVLLNFEQRWRKATKWKEFGILFKKASHWHDDALLKIDRISWILSPSLPRSKDGSTTVPGDNPLLWVNSEDDPDNWHVQIFRSIDSGSLKGFPKSVDLARSQNLTCAKNLVIDKSIQTGYIQAIRSAQHFIYIENQYFLGSSYAWPSYKDAGADNLIPMELALKIASKIRAKERFAVYIVLPMWPEGDPNSAAMQEILFWQSQTMQTMYDVVARELKSMQLVDLHPQDYLNFYCLGNREEFHEENSSSNGASVCSSHKHCRFMIYVHAKGMIVDDEYVIVGSANINQRSMAGTKDTEIAMGAYQPHHTWFARKRHPCGQIYGYRMSLWAEHLGMLEANFEEPESLECLRKVNSIAEENWRRYSSEDFSSLQGHILKYPVQVDADGKVCPLPEYETFVDVGGKVMGSHFPTIPDILTT 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0210 849 Gene3D Endonuclease Chain A 517 740 - -
Lele55g0210 849 Pfam Phospholipase D C terminal 769 838 IPR024632 -
Lele55g0210 849 FunFam Phospholipase D delta 220 464 - -
Lele55g0210 849 PIRSF PLD_plant 3 849 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lele55g0210 849 PANTHER PHOSPHOLIPASE D 11 838 IPR015679 -
Lele55g0210 849 ProSiteProfiles C2 domain profile. 1 143 IPR000008 -
Lele55g0210 849 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 150 IPR035892 -
Lele55g0210 849 SUPERFAMILY Phospholipase D/nuclease 187 454 - -
Lele55g0210 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 694 721 IPR001736 GO:0003824
Lele55g0210 849 SMART pld_4 694 721 IPR001736 GO:0003824
Lele55g0210 849 SMART pld_4 348 383 IPR001736 GO:0003824
Lele55g0210 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 348 383 IPR001736 GO:0003824
Lele55g0210 849 SMART C2_3c 17 142 IPR000008 -
Lele55g0210 849 Gene3D C2 domain 11 164 IPR035892 -
Lele55g0210 849 SUPERFAMILY Phospholipase D/nuclease 545 778 - -
Lele55g0210 849 Pfam Phospholipase D Active site motif 695 721 IPR001736 GO:0003824
Lele55g0210 849 Pfam Phospholipase D Active site motif 348 383 IPR001736 GO:0003824
Lele55g0210 849 Pfam C2 domain 16 145 IPR000008 -
Lele55g0210 849 CDD C2_plant_PLD 13 166 - -
Lele55g0210 849 Gene3D Endonuclease Chain A 220 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0210 Lele-ChrLele55 1315419 1319976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0210 11 685 Phospholipase D Gene Family (Wang group) AT4G35790 69.622 0.0 1024