Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0206 ATGGCGGTTTCACCTAGAAGCACTTCCAGCTTGGAATTGACCATATCTGTCCCTGGCTTTGCTTCTCTTCCTCCTCCTCTTCCTTCATCTGCAGTGAGAGAGTTAGACATAAACCGAGTACCGTCATCAGAAGAGGAATGGATAACAATGGAAGAAGAAGAAGAGAGCAGTAATGGAGGAGGATGTCCTCCTCGTAAGAAACTCCGTCTTACCAAGGAACAGTCCCGTCTCCTCGAGGACAGCTTCAGACAAAACCACACTCTGAACCCTAAGCAGAAGGAATCATTGGCAAAGCAGTTGAATCTGCGAGAGAGGCAAGTGGAAGTGTGGTTTCAGAACCGTAGGGCCAGGAGCAAGCTGAAGCAGACGGAGATGGAGTGCGAGTACCTCAAGAGATGGTTCGGATCGCTGACAGAGCAGAACAGAAAGCTGCGTAAGGAAGTGGAAGAGCTTAGGGCCATGAAGGTGGGTCCCCCCACTGTGATATCGCCCCACAGTTGCCACCCACTTCCGGCGTCAACCCTAACAATGTGTCCTCGCTGCGAGAAGGTCACGACCGCCGCCGCCGCCCGACATTCTCAATCGCCTCTATAA 594 0.5219 MAVSPRSTSSLELTISVPGFASLPPPLPSSAVRELDINRVPSSEEEWITMEEEEESSNGGGCPPRKKLRLTKEQSRLLEDSFRQNHTLNPKQKESLAKQLNLRERQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRKLRKEVEELRAMKVGPPTVISPHSCHPLPASTLTMCPRCEKVTTAAAARHSQSPL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0206 197 SUPERFAMILY Homeodomain-like 54 122 IPR009057 -
Lele55g0206 197 MobiDBLite consensus disorder prediction 48 67 - -
Lele55g0206 197 Coils Coil 134 154 - -
Lele55g0206 197 SMART HOX_1 63 125 IPR001356 GO:0003677
Lele55g0206 197 Pfam Homeodomain 65 119 IPR001356 GO:0003677
Lele55g0206 197 ProSitePatterns 'Homeobox' domain signature. 96 119 IPR017970 GO:0000981|GO:0006355
Lele55g0206 197 FunFam Homeobox-leucine zipper protein 18 49 126 - -
Lele55g0206 197 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 45 192 - -
Lele55g0206 197 SMART halz 121 164 IPR003106 GO:0006355|GO:0043565
Lele55g0206 197 ProSiteProfiles 'Homeobox' domain profile. 61 121 IPR001356 GO:0003677
Lele55g0206 197 CDD homeodomain 64 122 IPR001356 GO:0003677
Lele55g0206 197 Pfam Homeobox associated leucine zipper 121 155 IPR003106 GO:0006355|GO:0043565
Lele55g0206 197 Gene3D - 40 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0206 Lele-ChrLele55 1276248 1278410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0206 32 188 Homeobox Transcription Factor Family AT1G70920 62.963 4.33e-60 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele55g0206 Homeodomain 9.1e-18 CL0123