Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0203 ATGGAGGCTGATATTGATACAGTAAGTTCCTCGTCATCATCTTACTACCGCATTCTCGGTGTCGATTCGGATTCTTCTCTTGAAGAAATAAGGCGCGCTTATCGCAAGCTTGCCATGCAATGGCATCCGGATAGGTGGACAAGAACACCTTCTCTACTGGGTGAAGCAAAACGAAAGTTCCAGCAAATTCAGGAAGCCTATTCAGTATTATCGGACGAAAGCAAAAGAACGATGTACGATGCAGGCTTGTACGATCCCCAAGAAGAAGAGGATGAAGGGTTTTATGACTTTGTGCAAGAGCTGAAGACGCAAGTGAGCAGAGAGGAGAAGGAATATAGTATGGAGGAGTTGCAGAGCATGCTAATGGAGATGGTTCAAGAATTCGAGAATCCTTCGTGGCAATTCGGGGGCTCGGCAGTGGATGAGGAAAGCCAGTGCTCGAAGAGGGCACGTCTGCACTCGAAGATGAATTTGGGGTCACCTTTTCACGAGCCGGGGCTTCATTTGTATGAAACGAGGGGTTACTGTAGTTAG 534 0.4738 MEADIDTVSSSSSSYYRILGVDSDSSLEEIRRAYRKLAMQWHPDRWTRTPSLLGEAKRKFQQIQEAYSVLSDESKRTMYDAGLYDPQEEEDEGFYDFVQELKTQVSREEKEYSMEELQSMLMEMVQEFENPSWQFGGSAVDEESQCSKRARLHSKMNLGSPFHEPGLHLYETRGYCS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0203 177 ProSiteProfiles dnaJ domain profile. 14 83 IPR001623 -
Lele55g0203 177 PANTHER PUTATIVE, EXPRESSED-RELATED 11 139 - -
Lele55g0203 177 SMART dnaj_3 13 75 IPR001623 -
Lele55g0203 177 Pfam DnaJ domain 15 80 IPR001623 -
Lele55g0203 177 PRINTS DnaJ domain signature 16 34 IPR001623 -
Lele55g0203 177 PRINTS DnaJ domain signature 34 49 IPR001623 -
Lele55g0203 177 PRINTS DnaJ domain signature 55 75 IPR001623 -
Lele55g0203 177 CDD DnaJ 15 72 IPR001623 -
Lele55g0203 177 SUPERFAMILY Chaperone J-domain 11 86 IPR036869 -
Lele55g0203 177 Coils Coil 98 127 - -
Lele55g0203 177 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Lele55g0203 177 Coils Coil 53 73 - -
Lele55g0203 177 Gene3D DnaJ domain 3 117 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0203 Lele-ChrLele55 1249539 1250771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0203 8 81 C2H2 Transcription Factor Family AT1G74250 43.038 2.01e-12 62.8