Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0199 ATGACTGGAGCGTTGATAGGCCAAGAGACAGAGAGTGGCTTCATTAGAGGAGCTGCTGTAGGAGCCATATCAGGAGCAGTGTTTTCCCTTGAAGTGTTTGAATCTTCCCTTATTCTTTGGCAAACCGACGAATCTGGGATTCGGTGTCTCTTGTACTTGATTGACGTTATTACTAGCCTACTGAGTGGGAGGCTTGTCCGTGAGAGGATTGGTCCAGCCATGCTAAGTGCTGTCCAAAGCCAGATGGGTGCTGTTGAAGCAAGCTTTGATGAGATTCAAAACCTCTTTGACACTGGAGGTGCCAAAGGTTTATCAGGAGATTTAGTTGAAAAAATTCCAATATTAACAATCACAGGTGACGACAATATTGATGCCTGTGGTGAAAGAGTTTCCTGTTCGGTTTGCCTCCAGGACTTTCAGCTTGGAGAGACAGTTAGAAAATTGCCGCATTGTCATCACATGTTTCACCTACCTTGTATAGATAAGTGGCTCTTCGGGCACGGTTCTTGCCCATTATGCAGAAGAGATCTGTAA 534 0.4513 MTGALIGQETESGFIRGAAVGAISGAVFSLEVFESSLILWQTDESGIRCLLYLIDVITSLLSGRLVRERIGPAMLSAVQSQMGAVEASFDEIQNLFDTGGAKGLSGDLVEKIPILTITGDDNIDACGERVSCSVCLQDFQLGETVRKLPHCHHMFHLPCIDKWLFGHGSCPLCRRDL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0199 177 SUPERFAMILY RING/U-box 131 177 - -
Lele55g0199 177 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 1 176 IPR044523 -
Lele55g0199 177 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 177 IPR013083 -
Lele55g0199 177 CDD RING-H2_PA-TM-RING 132 174 - -
Lele55g0199 177 ProSiteProfiles Zinc finger RING-type profile. 132 174 IPR001841 -
Lele55g0199 177 SMART ring_2 132 173 IPR001841 -
Lele55g0199 177 FunFam NEP1-interacting protein-like 1 92 177 - -
Lele55g0199 177 Pfam Ring finger domain 131 174 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0199 Lele-ChrLele55 1228038 1230037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0199 1 177 C3H Transcription Factor Family AT5G66070 77.401 3.69e-96 276