Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0165 ATGACCAAGTCTCACAGTTTTCTTCATAATCTGATTAAGCCCTTCAAATTCGGTTCCAGTAAAGAGGGAAGCAACGAAGAAGAGTTAGAGAGAATTGCTGCCCAGGAGCAAAAGATCTTTCCCTATGAAACCTTACTTGCTGCTACCAAAAATTTTCATTCTCATCATAAGCTTGGTGAGGGAGGTTTTGGACCCGTCTACAAGGGGAAGTTGGACGATGGAAGAGAGATTGCGGTAAAGAAGTTATCACAAAGCTCAAATCAAGGGAACAAAGAGTTCATGAATGAGGCCAAGTTGTTGGCTCGCGTGCAGCACCGGAATGTGGTGAATTTGTTGGGTTATTGTGCCCATGGCACAGAGAAGCTACTCGTGTATGAGTATGTTCCTCATGAGAGCCTTGACAAGCTTTTATTTAAATCTCACCGAAGAGAGCAGCTAGATTGGAAAAAGAGGTTTGACATAATCACAGGCATTGCAAGGGGATTACTCTATCTTCACGAAGACTCGCATAGCTGCATCATCCACCGAGACATCAAGGCTAGTAATATCTTGCTCGATGACAAATGGTTGCCCAAGATTGCAGACTTTGGCATGGCTCGTCTCTTCCCGGAGGATCAAACTCACGTCAATACACGGGTGGCTGGCACCAATGGATATATGGCTCCAGAGTATGTAATGCATGGGCATTTATCAGTGAAGGCAGATGTGTTTAGCTATGGGGTTTTGGTGCTGGAGCTGATAAGTGGCCAAAGAAACTCAATGTTTAGCCTGGAGGTGGATGCACATAATCTCCTTGATTGGTCATACAAGCTTTACAAGAAAGGGAGGAGCTTAGAAATGGTTGACCCAGCATTAGCAGATTCAGCAATAGCCGATCAAGTAGCAATGTGCATACAACTGGGTCTGCTATGTGTTCAAGGGGATCCGCAGCTCCGGCCAAGCATGCGGCGGGTGGTGGTGATGCTGTCGAAGAAGCCGGGCCACATGGATGAGCCGACTAGACCGGGAGCGCCTGGTTCCAGATACAGAAGGCATCGCAGGCCCTCTGCATTTTCATCAGCAGCTGGTACTTCTGGTGCTGAATCTGATTCTCGGACTTCAAACTCAAGCAGTAACTACACCGCCACTGCAACAACACCTGGAACAAGCTCCGCCGCTCGAGAAATTGACCATCGCGGAAAACGCCCCATGCATGAGGCTTAG 1203 0.4763 MTKSHSFLHNLIKPFKFGSSKEGSNEEELERIAAQEQKIFPYETLLAATKNFHSHHKLGEGGFGPVYKGKLDDGREIAVKKLSQSSNQGNKEFMNEAKLLARVQHRNVVNLLGYCAHGTEKLLVYEYVPHESLDKLLFKSHRREQLDWKKRFDIITGIARGLLYLHEDSHSCIIHRDIKASNILLDDKWLPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSYGVLVLELISGQRNSMFSLEVDAHNLLDWSYKLYKKGRSLEMVDPALADSAIADQVAMCIQLGLLCVQGDPQLRPSMRRVVVMLSKKPGHMDEPTRPGAPGSRYRRHRRPSAFSSAAGTSGAESDSRTSNSSSNYTATATTPGTSSAAREIDHRGKRPMHEA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0165 400 FunFam Cysteine-rich receptor-like protein kinase 10 129 334 - -
Lele55g0165 400 SUPERFAMILY Protein kinase-like (PK-like) 37 335 IPR011009 -
Lele55g0165 400 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 26 372 - -
Lele55g0165 400 ProSiteProfiles Protein kinase domain profile. 52 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0165 400 SMART serkin_6 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0165 400 MobiDBLite consensus disorder prediction 351 385 - -
Lele55g0165 400 CDD STKc_IRAK 58 324 - -
Lele55g0165 400 Gene3D Phosphorylase Kinase; domain 1 16 127 - -
Lele55g0165 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Lele55g0165 400 MobiDBLite consensus disorder prediction 322 400 - -
Lele55g0165 400 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Lele55g0165 400 Pfam Protein kinase domain 52 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0165 400 Gene3D Transferase(Phosphotransferase) domain 1 128 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0165 Lele-ChrLele55 1036436 1039853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0165 40 336 Receptor kinase-like Gene Family AT4G11530 51.839 3.04e-109 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele55g0165 Pkinase 1.8e-50 CL0016