Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0146 ATGGGTTCCGAAGGATCCGCGGTTGTTGTACCCAGGAGTTTCAGGTTATTGGAAGAGCTTGAAAGAGGTGAAAAGGGAATCAGTGATGGAACTGTCAGCTATGGCATGGATGATGCTGACGATATATACATGCAGTCATGGACAGGGACAATTATAGGCCCCCCTGGTACTGTTCATGAAGGGCGTATCTACCAGTTGAAATTGTTCTGTGGCAAGGATTATCCAGACAATCCACCATCTGTAAGATTTCAAACAAGGATTAACATGACTTGTGTCAACCAAGATACCGGAGTGGTTGAGCCACATCTGTTTCCCATGCTGGCTAATTGGCAGCGAGAGCATACAATGGAAGACATTCTGATGCAATTGAAGAAGGAAATGCTGTCTCCTCAAAATCGGAAGCTAGCTCAGCCTCCTGAAGGTAACGAAGATGGCAGGATTGATCAAAAGGGGCTGCTGCTCAAATGGTTTCGTGCAATCGGTTGCGGCGTCTTCTTGTCCGCTGCATTTTCAATTTTCATCAATTTGACTCTCAGTCAGAAAACTCGCCCCGGGAAATGTCCTTCTTTGTTGCTACCAATTGAAGTGAGAAATATCCAGAGAGCCAAGCATGGAAGTGACACCGGAGTCTATGATTCTCAGGGAAGGTTTGTTGCTTGGAAGTTCGAAGAAATATTCAGGAAGCATGCAAGAAGCCACCCAGATGCTTTAACATCACATGAACTGGACGCCATGCTTAAAGCAAACAGAGTTCCTAAGGATTACTCTGGCTGGGTTGGTGCCTACGCAGAGTGGAAGCTGTTGTATTATCTGTGCAAAGACAAGAATGGGTTACTGCACAAAGAAACAGTAAGAGCTGTTTATGATGGCACCTTGTTTCATCAAATGGAAAAGGACCACTCTTCCCACAGCACCTTCTAA 921 0.4539 MGSEGSAVVVPRSFRLLEELERGEKGISDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQDTGVVEPHLFPMLANWQREHTMEDILMQLKKEMLSPQNRKLAQPPEGNEDGRIDQKGLLLKWFRAIGCGVFLSAAFSIFINLTLSQKTRPGKCPSLLLPIEVRNIQRAKHGSDTGVYDSQGRFVAWKFEEIFRKHARSHPDALTSHELDAMLKANRVPKDYSGWVGAYAEWKLLYYLCKDKNGLLHKETVRAVYDGTLFHQMEKDHSSHSTF 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0146 306 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
Lele55g0146 306 PANTHER PEROXYGENASE 3-RELATED 132 302 IPR007736 -
Lele55g0146 306 SMART ubc_7 14 163 - -
Lele55g0146 306 SUPERFAMILY UBC-like 9 142 IPR016135 -
Lele55g0146 306 Pfam Caleosin related protein 154 296 IPR007736 -
Lele55g0146 306 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 170 IPR000608 -
Lele55g0146 306 Pfam Ubiquitin-conjugating enzyme 36 134 IPR000608 -
Lele55g0146 306 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 2 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0146 Lele-ChrLele55 927250 932162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0146 157 305 Acyl Lipid Metabolism Gene Families AT1G70670 65.772 2.60e-68 209