Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0141 ATGGCTCCTCATTGTCCCCCGCGTAATGCTATCCATTTCTTCAAGATCATTCTCGAATATTCTCTTCAAGAAGGAAAGCTTAAATTACCAGACAACTTCATACGAAAATATGGAGGTGGCATGCCAAATCCAGTGGGTCTGAAGCCACCAGATGGAACTGAATGGGAAATACATTGGACAAAATATCAAAGTGGTGAGGTTTGGTTTGAGAAGGGTTGGGATGAGGTTGTGAGATACTACTCTTTAGGCCATGGCCATTTGGTGTTGTTCAGATACGAGGGAACTAGAACTACTTGTTGCTTTGAGGTCAATATTTTTGACAAGAGTGCATTAGAAATAGACTACCCTCTTCATGGAAACCTCCAACAAATTCACGATGATTCTGATTCACTTGAAATCTTGCACGAGAGACCTCCTCTGCATAAAGGAGCTAGCCGAAAACCGCCATTAACATCTTCTAGTCGCCCTTCCAAGAAAATTAGAGCTGGAGAAACTGAAAGGATGTCTAATCAGCAAAAGATGCACTCAGATGGGAATAAGCTGAAGTCCGCTAAAGCAGAACCGTATCTTATCAAGCTTGAATCACAAGTTTCATCAGGAACTGTGGGCAGAAGCAATTTTTCCACTAAAAAAAGCCTAAAATTCACGGATATTAAAAAACGAGAGGAGAAACCACTAACTTGTGATGAGAAGGAGAGAGCTTTACATAGAGTCAACACTTTCACGGCCAAAAATCCCTATTTCAAAATTGTCATACAGCCAGCATACATCAAGAACTGTTTGAGTGTGCCAGCAAATTTTGTGGAACAGTATTTGAAGCAGAAGAGGGAAGGAGTTGTTCTCCTCCGGGTTTCAGATGGTAGAACTTGGCGTGTGAGGTGCAATAGGCAAGAAGGAAAGGATCACAGGTTCCGACTCTACAGTGGGTGGAACTCTTTTGCAAAAGGCAATAACTTGAAAGTGGGTGATGTTTGTGTTTTTGAACTCACAAACGCCATTGACATCTCCTTCTTAGTTCATGTTTTTGGAGGTTCCGGGGATCCATATGGCTGA 1053 0.4207 MAPHCPPRNAIHFFKIILEYSLQEGKLKLPDNFIRKYGGGMPNPVGLKPPDGTEWEIHWTKYQSGEVWFEKGWDEVVRYYSLGHGHLVLFRYEGTRTTCCFEVNIFDKSALEIDYPLHGNLQQIHDDSDSLEILHERPPLHKGASRKPPLTSSSRPSKKIRAGETERMSNQQKMHSDGNKLKSAKAEPYLIKLESQVSSGTVGRSNFSTKKSLKFTDIKKREEKPLTCDEKERALHRVNTFTAKNPYFKIVIQPAYIKNCLSVPANFVEQYLKQKREGVVLLRVSDGRTWRVRCNRQEGKDHRFRLYSGWNSFAKGNNLKVGDVCVFELTNAIDISFLVHVFGGSGDPYG 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0141 350 ProSiteProfiles B3 DNA-binding domain profile. 246 345 IPR003340 GO:0003677
Lele55g0141 350 SMART B3_2 247 345 IPR003340 GO:0003677
Lele55g0141 350 SMART B3_2 13 109 IPR003340 GO:0003677
Lele55g0141 350 ProSiteProfiles B3 DNA-binding domain profile. 12 109 IPR003340 GO:0003677
Lele55g0141 350 SUPERFAMILY DNA-binding pseudobarrel domain 9 109 IPR015300 -
Lele55g0141 350 Gene3D - 226 344 IPR015300 -
Lele55g0141 350 CDD B3_DNA 12 107 IPR003340 GO:0003677
Lele55g0141 350 MobiDBLite consensus disorder prediction 159 180 - -
Lele55g0141 350 SUPERFAMILY DNA-binding pseudobarrel domain 242 345 IPR015300 -
Lele55g0141 350 CDD B3_DNA 246 342 IPR003340 GO:0003677
Lele55g0141 350 PANTHER B3 DOMAIN-CONTAINING 9 339 - -
Lele55g0141 350 Gene3D - 7 110 IPR015300 -
Lele55g0141 350 MobiDBLite consensus disorder prediction 137 180 - -
Lele55g0141 350 Pfam B3 DNA binding domain 248 342 IPR003340 GO:0003677
Lele55g0141 350 Pfam B3 DNA binding domain 15 108 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0141 Lele-ChrLele55 902770 904198 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0141 13 342 B3 DNA Binding Superfamily AT3G18990 28.529 3.24e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele55g0141 B3 2.3e-19 CL0405