Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0129 ATGGCGATGACGAGGGAGATAGAGGAGGATGGAGACGTACAGAACAACGCGGGGAAGAGGCTGAAGTGTATGAAGAATGAGGCAAAGGGTCAAACAGAGGAGGAAGCTGTGGAGGATGAAAGTGAGCTTCCTCTCCAGCCCGGCCTCTTCTTCTATCCAACCACTCCTACGTCTTTCGTTGTCTCCGATGCTCTTGAACCCGATTTTCCCATCATCTATGTCAACAAGGTCTTTGAATTCGTCTCCGGCTATCGTGCCGATGAGGTTTTGGGTCGGAACTGTCGGTTCTTACAGTATAGGGACCCTCATGCTCAAAGGAGGCACCCTTTGGTGGATCCTGTTGTTGTGTCTGAGATTAGAAGATGTCTTGAGGAAGGTATTGAGTTCCAAGGTGAACTTCTGAATTTCAGGAAGGATGGCATTCCTTTAGTGAACAGGCTGAGACTTGCTCCAATTCATGATGATGATGGAACTATGACACATGTAATAGGCATCCAGCTATTTTCTGAAGCAAATATAGATCTAAATCGTGTCTCATATCCGGTGTTCAAGGAGACCTGCAGTCAGGAAATTGACAAGACTGGTAAAAATTCTCCTAAGAGTGGACAACCAATATACCGCCAGCGCCAAGAGATGTGTGGCATTCTTCAGCTTTCTGATGAGGTCTTGGCTCATAACATCTTATCACGCTTGACACCAAGGGATGTTGCATCAATTGGGTCTGTGTGCAGAAGGATCCGTCAATTAACGCTGAATGAGCATGTTAGAAAGATGGTGTGTCAAAATTCATGGGGAAAAGAAGTGACTGGTACATTGGAACTGATGACCAAGAAATTAGGATGGGGTCGTCTTAGCCGAGAACTGACCACTCTTGAGGCTGTTCGTTGGAGAAAACTGACAGTTGGAGGTGCAGTAGAGCCTTCACGCTGCAATTTCAGTGCTTGTGCTGCAGGAAATCGCCTTGTATTGTTCGGAGGTGAAGGAGTTGATATGCAGCCTATGGATGACACTTTTGTCCTCAATCTTGATGCTAAAAATCCTGAGTGGCGTAGGATTAGTGTGAAATCATCCCCACCAGGAAGGTGGGGCCACACACTCTCATGCTTAAATGGTTCTTGGTTGGTGGTATTTGGAGGATGTGGTAGGGAAGGATTGCTTAATGACGTGTTTGTTCTTGATTTGGATGCTCAACAGCCAACATGGAAAGAAGTCTGTGGTGGAACTCCGCCTCTCCCTAGATCTTGGCACAGCTCTTGCACCGTTGAAGGGTCTAAATTGGTAGTCTCAGGTGGGTGCACAGATGCTGGGGTGCTTCTTAGTGACACATACCTACTGGACCTTACTACGGATAATCCAACATGGAGAGAAATTCCAACTTCTTGGGCTCCTCCTTCTCGGTTGGGGCACTCGCTCTCTGTATATGGCCGGACAAAAATTCTCATGTTTGGCGGACTTGCCAAGAGTGGACACTTGCGATTACGATCAGGGGAGGCTTATACGATTGATTTGGAAGATGAAGAGCCTCAGTGGAGGCAGCTAGAATATAGCACATTCTCTGGAATAGGTGGTCAAAGTGCCGTGGTTCCTCCACCTCGGCTAGATCATGTCGCAGTGAGCATGCCTTGTGGGAGGATTATTATTTTTGGAGGCTCCATCGCAGGGCTGCACTCTCCATCCCAGCTCTTTCTTTTGGACCCATCTGAGGAGAAACCATCATGGAGGATCCTCAATGTGCCAGGGCAACCGCCAAAATTCGCTTGGGGTCACAGCACTTGTGTGGTTGGAGGGACTAGGGTTTTGGTTTTGGGTGGTCATACAGGGGAGGAGTGGATACTTAATGAGTTGCATGAGTTATGCTTAGCAAGCAAGCAGGACTCCGACCTTAGGTGA 1890 0.4783 MAMTREIEEDGDVQNNAGKRLKCMKNEAKGQTEEEAVEDESELPLQPGLFFYPTTPTSFVVSDALEPDFPIIYVNKVFEFVSGYRADEVLGRNCRFLQYRDPHAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFRKDGIPLVNRLRLAPIHDDDGTMTHVIGIQLFSEANIDLNRVSYPVFKETCSQEIDKTGKNSPKSGQPIYRQRQEMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTLNEHVRKMVCQNSWGKEVTGTLELMTKKLGWGRLSRELTTLEAVRWRKLTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRISVKSSPPGRWGHTLSCLNGSWLVVFGGCGREGLLNDVFVLDLDAQQPTWKEVCGGTPPLPRSWHSSCTVEGSKLVVSGGCTDAGVLLSDTYLLDLTTDNPTWREIPTSWAPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEEPQWRQLEYSTFSGIGGQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASKQDSDLR 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0129 629 Pfam Galactose oxidase, central domain 374 420 - -
Lele55g0129 629 Pfam Galactose oxidase, central domain 423 474 - -
Lele55g0129 629 FunFam Putative LOV domain-containing protein 492 624 - -
Lele55g0129 629 ProSiteProfiles PAS repeat profile. 71 102 IPR000014 -
Lele55g0129 629 Gene3D PAS domain 52 177 - -
Lele55g0129 629 CDD PAS 55 165 IPR000014 -
Lele55g0129 629 SUPERFAMILY Galactose oxidase, central domain 295 613 IPR011043 -
Lele55g0129 629 SUPERFAMILY PYP-like sensor domain (PAS domain) 66 166 IPR035965 -
Lele55g0129 629 FunFam Putative LOV domain-containing protein 286 491 - -
Lele55g0129 629 Pfam F-box domain 215 250 IPR001810 GO:0005515
Lele55g0129 629 Pfam PAS domain 65 165 IPR000014 -
Lele55g0129 629 Pfam Kelch motif 533 580 IPR011498 GO:0005515
Lele55g0129 629 Gene3D - 205 301 - -
Lele55g0129 629 Gene3D - 492 624 IPR015915 GO:0005515
Lele55g0129 629 Gene3D - 367 491 IPR015915 GO:0005515
Lele55g0129 629 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 39 622 - -
Lele55g0129 629 FunFam Adagio protein 1 48 177 - -
Lele55g0129 629 SUPERFAMILY F-box domain 209 287 IPR036047 GO:0005515
Lele55g0129 629 TIGRFAM sensory_box: PAS domain S-box protein 70 165 IPR000014 -
Lele55g0129 629 Pfam Galactose oxidase, central domain 309 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0129 Lele-ChrLele55 831891 835253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0129 58 179 AGC Kinase Gene Family AT5G58140 34.677 4.80e-15 77.0