Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0116 ATGAAGTTCAACATTGCCAACCCCACCACTGGGTGCCAGAAGAAGCTTGAAATCGATGATGATGCAAAACTCCGAGCATTCTGGGACAAGAGGATATCCCAAGAAGTCAGTGGAGATGCACTGGGGGAGGAGTTTAAGGGCTATGTTTTCAAAATAACTGGAGGCTGTGACAAGCAGGGTTTTCCAATGAAGCAGGGAGTGCTGACTCCTGGACGTGTTCGTCTCTTGCTTCACAGAGGAACTCCTTGCTTCCGTGGTTATGGCAGAAGGAATGGAGAGAGGAGAAGGAAGTCTGTTCGGGGTTGCATTGTCAGTCCAGACCTCTCTGTTCTTAACTTGGTTATTGTGAAGAAGGGTGAGAATGATCTTCCAGGATTGACTGACATTGAGAAGCCTAGAATGAGAGGGCCAAAGAGGGCTTCGAAGATTAGGAAATTGTTCAATCTCTCCAAGGAGGATGACGTACGCAAATATGTTAACACATACCGTAGAACCTTTACGACCAAAACTGGCAAGAAGGTGAGCAAAGCTCCCAAGATTCAGAGGTTGGTGACTCCCTTGACTTTGCAAAGGAAGCGAGCAAGGATTGCTGACAAGAAGAAGAGAATTGCCAAGGCCAAGTCAGAGGCTGCTGAATATCAAAAGCTGCTTGCCAGCCGCTTGAAGGAACAGCGTGAACGCCGCAGTGAGAGTTTGGCTAAGAGGAGATCTAAGCTGTCTCATGCATCTAAGCCATCAATTACTGCTTAA 750 0.4733 MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVSGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSHASKPSITA 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0116 249 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Lele55g0116 249 Gene3D - 133 234 - -
Lele55g0116 249 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Lele55g0116 249 MobiDBLite consensus disorder prediction 219 249 - -
Lele55g0116 249 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Lele55g0116 249 Coils Coil 189 216 - -
Lele55g0116 249 MobiDBLite consensus disorder prediction 219 237 - -
Lele55g0116 249 PANTHER 40S RIBOSOMAL PROTEIN S6 1 240 IPR001377 GO:0003735|GO:0005840|GO:0006412
Lele55g0116 249 PIRSF RPS6e 1 249 IPR014401 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0116 Lele-ChrLele55 746087 747604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0116 1 249 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 71.084 4.92e-119 336