Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0113 ATGGTTCCGAACTTTCTCTTCCTCTGCTTCGCCCTCTCCCTCCTCTCCCACATTCAATTCTCAATTTCCCAGAATACCATCAATTTTACTTCCTTCAATGCCTCAGACTCCCCATGGCGTCCAAACCAGAATCGCATCCTTCTCTCCCCGAATTCCAATTTCTCTGCCGGCTTCTTCCGCATCTCCTTAGATCGTTACACCTTCTCCGTTTGGTTCACCAACGTCCCGCTTCACGCTGACCCCGTCGTATGGTCTGCAAACTTCAGTTCGCCGGTCACCGGCTCCGCTTCACTCGTCATCAACTCCAAAGGCGAGCTTTTGCTCGATGATATCCTCTCGGTAAACGCTTCGTCTACTTCCAATTCCACATCGAGCGTTCTCATTCTCAGTGATCAAGGCAACTTGATTTTTGGAGATTGGAGTAGCTTTGGTAGCCCAACGAACACCATTCTCCCGAACCAAAATATCACAGAAATCGCGCTTCATTCCGAAAATGGGCTCTTCAGATTCGTCAAATCCAAGGATCTGATCCTCTATTCTGCGAGTCTGAGTCTCAATTACTCCTTGGCTAATTACTACAACACCCCAAGCCCGTTGGTGATCATGGACGACCTCGGCAAGATGACTATGGTAAGTGGCTCTTTTCTTACAAGCGATTACGGCGATAATCGGCTCCGGAAAATGGTTCTGGGAAATGATGGGAATCTCAAAATCTACAGTTTCTACCCCGAGCAAAAAACCCCGTGGGTTGAAGTTTGGTTGGCGATTTGGCAACCGTGTAAAATTAGAGGCAAATGCGGTCCTAATGCTATATGCTTGCCTTCAACTGGTATAAATGATTCGACTTCATGCGTTTGCCCGCCTGGGTTCAAGCAAAATCAAGGAGGGCCTCAACAAGGTTGTGTAAGGAAAATCAAACCTACCAGTAACATCAAATTTCTGAAGCTGGATTATGTGAACTATACGAGCACCAACATGATCGGTATTGATGCTAGAAACTTCACAATTTGTGAATCTAATTGCAGTGCAAACTCACAATGTCTTGGGTTTGGCTATAAATACGATGGATCTGGTTTTTGTTCTTTGGTGCTGGGTGAACAACTCCTATATGGTTATTGGTCTCCAGGTACTGAGGCCTCGCTGTTTCTTAAGGTAGACAAATCCGAAACCGAAGCCTCCAATTTCACTGGGATGACACAAGTTTTGCAGACATCGTGCCCCGTTCGAATCAGCCTCCCACTACCCCCTAAAGATTCGAATTCCACAACTCGAAACATTGCCGTAATATGCACTCTTTTCGCTGCTGAGCTCATTTCCGGGATCGCTTTCTTCTGGTCTTTCCTCAAGAGGTACATCAAGTACAGAGACATGGCTACCACTCTCGGTCTCGAGTTCCTTCCCGCTGGTGGCCCGAAACGCTTCTCGCATGCCGAGCTCAAAACCGCCACCAAGGACTTCTCCAACCTCATCGGAAGAGGTGGGTTCGGCGAGGTTTACAAAGGAGAGCTACCGGATCATCGTGTTGTCGCCGTCAAGTGCCTCAAGAATGTCGCCGGCGGTGACGCCGAGTTCTGGGCTGAGGTCACCATCATTGCCAGAATGCACCACCTCAACTTGGTCCGCTTGTGGGGCTTCTGTGCCGAGAAAGGTCAACGGATCTTGGTCTACGAGTATATCCCCGGGGGGTCATTGGACAAATATCTATTCCGTCGTCCTCGGGCCGGGTCCAAAAACGGGGAATTATCTCCGGATTCAGATCCAAAGCATGACCCAAAGACGGAACAAAAGCCAATCCTTGACTGGAATATCCGGTATAGGATAGCCTTGGGTGTGGCAAGATCCATAGCATACTTGCACGAGGAATGTTTGGAATGGGTTTTGCATTGTGATATCAAGCCCGAGAACATCCTATTAGGAGAAGATTTCTGTCCTAAAATATCAGATTTTGGATTAGCTAAGCTAAGAAAGAAAGAGGATATGGTAACCATGTCTAGGAGGAGAGGGACTCCGGGTTATATGGCTCCGGAATGGATAACGACGGATCCAATCACCTCGAAAGCAGACGTGTACAGCTTTGGGATGGTGTTGCTGGAGCTGGTGAGCGGGGTGAGGAACTTTGAGATTCAAGGATCATTCTTGAACAGTGAAGAGTGGTATTTTCCAGGGTGGGCTTTTGATAAGATGTTCAAGGAGATGAGGCCTGAAGACATTCTGGACCGTGAAATTAAGCAACTTTATGACAGTAGGGCCCACTTTGATATGATCAATAGGATGGTGAAGACGGCAATGTGGTGCCTTCAAGACAGGCCCGAGATGAGGCCCACCATGGGAAAAGTGGCTAAGATGTTGGAAGGCACAGTGGAGATTATTGAGCCCAAGAAGCCCACAGTCTTCTTCCTTGGAGATGAATAG 2412 0.4797 MVPNFLFLCFALSLLSHIQFSISQNTINFTSFNASDSPWRPNQNRILLSPNSNFSAGFFRISLDRYTFSVWFTNVPLHADPVVWSANFSSPVTGSASLVINSKGELLLDDILSVNASSTSNSTSSVLILSDQGNLIFGDWSSFGSPTNTILPNQNITEIALHSENGLFRFVKSKDLILYSASLSLNYSLANYYNTPSPLVIMDDLGKMTMVSGSFLTSDYGDNRLRKMVLGNDGNLKIYSFYPEQKTPWVEVWLAIWQPCKIRGKCGPNAICLPSTGINDSTSCVCPPGFKQNQGGPQQGCVRKIKPTSNIKFLKLDYVNYTSTNMIGIDARNFTICESNCSANSQCLGFGYKYDGSGFCSLVLGEQLLYGYWSPGTEASLFLKVDKSETEASNFTGMTQVLQTSCPVRISLPLPPKDSNSTTRNIAVICTLFAAELISGIAFFWSFLKRYIKYRDMATTLGLEFLPAGGPKRFSHAELKTATKDFSNLIGRGGFGEVYKGELPDHRVVAVKCLKNVAGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEYIPGGSLDKYLFRRPRAGSKNGELSPDSDPKHDPKTEQKPILDWNIRYRIALGVARSIAYLHEECLEWVLHCDIKPENILLGEDFCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITTDPITSKADVYSFGMVLLELVSGVRNFEIQGSFLNSEEWYFPGWAFDKMFKEMRPEDILDREIKQLYDSRAHFDMINRMVKTAMWCLQDRPEMRPTMGKVAKMLEGTVEIIEPKKPTVFFLGDE 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0113 803 FunFam Serine/threonine-protein kinase 559 794 - -
Lele55g0113 803 Gene3D Transferase(Phosphotransferase) domain 1 561 794 - -
Lele55g0113 803 ProSiteProfiles PAN/Apple domain profile. 301 386 IPR003609 -
Lele55g0113 803 SMART blect_4 42 146 IPR001480 -
Lele55g0113 803 ProSitePatterns Protein kinases ATP-binding region signature. 490 512 IPR017441 GO:0005524
Lele55g0113 803 PANTHER OS07G0415500 PROTEIN 11 798 - -
Lele55g0113 803 ProSiteProfiles Protein kinase domain profile. 484 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0113 803 SUPERFAMILY Protein kinase-like (PK-like) 466 784 IPR011009 -
Lele55g0113 803 FunFam S-receptor-like serine/threonine-protein kinase 456 558 - -
Lele55g0113 803 Pfam D-mannose binding lectin 82 157 IPR001480 -
Lele55g0113 803 CDD STKc_IRAK 490 785 - -
Lele55g0113 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Lele55g0113 803 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 178 IPR036426 -
Lele55g0113 803 Pfam S-locus glycoprotein domain 216 293 IPR000858 GO:0048544
Lele55g0113 803 Gene3D - 38 147 IPR036426 -
Lele55g0113 803 Pfam Protein kinase domain 488 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0113 803 SMART serkin_6 484 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0113 803 PIRSF SRK 1 803 IPR024171 GO:0004674
Lele55g0113 803 Gene3D Phosphorylase Kinase; domain 1 459 558 - -
Lele55g0113 803 ProSiteProfiles Bulb-type lectin domain profile. 32 150 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0113 Lele-ChrLele55 722663 725074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0113 396 795 Receptor kinase-like Gene Family AT4G18250 36.145 8.41e-74 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele55g0113 Pkinase 2.5e-45 CL0016