Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0111 ATGGAGAAACCTCGCTCGAGTTTCGGGGTTTCTTTCTTATGCCGTATCCTTTTGATTATTTCCATGGTCCTAGCGGCTAGGTCTCAGGACGCAGCGGTTATGGCCATTCTCAAGAACTCGATCAAGGGGAGTTCGCTCCAATGGTCCGACCCGGATTTCTGCAAATGGTCTCACATTCAATGCAATCCTGCGAAACGGGTCACCGCAATTCAGATTGGGAACCTGTACCTGCAAGGCTCACTGCCAAAGGAGCTCTCTAATCTCACAGAATTACAGCGTTTCGAGTGCCAATCCAACAGTATTTCAGGGGCGTTTCCGTCATTACCCAGTTCCTTACAGCGCCTTTTCATTTCAGACAACGGCTTCACCTCCATGCCTCTAGATTTCTTCAAGGGCAAGTCGGCGTTAGAAGAAATAAGAATCGACAATAACCCTTTTCCTCCTTGGCGAATTCCAGACACACTCAAGGACTGCGCAGCATTAACAACATTCTCAGCGCAAAATGTTTCTTTTGTCGGAGAAATTCCAGATTTTTTCGGTAAAGATGGTCCATTCCCAGGTTTGACTAAATTGTCTCTGTGTTTCAATCAACTCGTAGGTGGTTTGCCTTCGAGCTTCTCAGTTAGCTCCATAGAGCTACTATGGGTGAATGGACAAAAGAGTACCTCTAAACTTAACGGCACACTTGCGGTGTTACAGAACATGACTTCATTGAAGCAGATTTGGATTCATGGTAATTCCTTCACTGGTCCTATCCCTGACCTGTCCCACCATGATCAATTGGGGGATGTGAGTTTGAGGGATAACCAGTTAACTGGCGTTGTCCCGTCGTCTCTTATGGCTCTTCGTAGTTTGCAAGTCGTGAATTTGACTAATAATTATCTTCAAGGACCGATGCCGGCGTTTAAATCAGGAGTACGTGCGGATATAGATGGAATAAACCAGTTTTGCACGAACAAGCCTGGCCAGCCATGTAGTTCATTGGTGAATGCTTTATTGTCTGTGGTGGAACCTTTGGGTTATCCCTTGAAGTTTGCTCAAAATTGGAAGGGCAATGATCCTTGTGCTGGTGACTGGATAGGGATTGTTTGCACAGGTGGAAATATCACGGTTGTGAATTTTCAGAACATGGGCCTTTCTGGGACTATTTCTCCTAGTTTTTCCAGCTTCACATCTGTGAAAAAGTTGCTTCTTGCTAACAATAATCTCACTGGTACACTACCTCAGGAGCTTACAAGTATGCCTCTTTTGCAAGAGCTGGATATTTCGAATAATCATATATATGGTGTGGTGCCAACATTTCGGGAAGGTGTGGTTCTTAAATCAGATGGGAATCCTGATATCGGAAAGGATAAGCCTTCGGCTCCACCGGGAGGACCTAGCTCGGGTAATTCTGCAGGTAATGGTAAGAAACATCATTCAACAGTCATTGTTGTCACTGTCGTGGTGGGGGTTGTCGTTTTACTTGGTGTGATAGTTTGGGGACTAGTTTGGTTTCATAGAAAAAGGAAGTATTCAAGCAAAACTCAAGGTCAGAATGGCGTTGTGATACATCCTCCTCATTCTGGAGACAGAAAACACTTGAAAATCAGTGTTGTAGGTGCTAATAGTGGAGGAGGAACTAATAATGGACGGATTACCAGTTCTAGTAATGCAGCTGGTGATGTTCATGTGGTGGAAGCTGGTGGTATGGTAATTTCAATTCAAGTTTTACGAGAAGCAACCAACAATTTCAGTAGAGAGAACGTACTGGGGAGGGGCGGTTTCGGCACCGTGTACTTAGGAGAATTGCACGATGGGACGAAGATCGCGGTTAAGAGAATGGAAACTGGAATGGAGGGTGAGAAAGGGCTGAGTGAATTCAAAGCTGAAATCGCTGTACTCACTAAGGTTCGTCATAAGCATTTGGTTGCTCTTATGGGGTATTGCTTGGATGGAAATGAGAGGCTTCTTGTGTATGAGTACATGCCTCAGGGGACTCTGAGTAGGCATTTGTTCAACTGGAAAGATGAAGGCTTAAAGCCACTGGAATGGACAAGAAGACTTATCATTGCCTTGGATGTTGCTAGAGGAGTTGAATATCTTCATGGTTTGGCCCAACAAATTTTCATTCATAGGGATCTCAAACCATCGAACATCCTTCTTGGCGATGATATGCGAGCTAAAGTGTCTGACTTCGGATTGGTTCGCCTCGCTCCAGAAGGAAAAGCCTCATTCGAAACTAGACTTGCCGGAACTTTCGGCTATTTGGCACCAGAATATGCAGTAACTGGACGAGTAACGACGAAAGTCGATGTATATAGTTTTGGAGTGATTCTTATGGAGATGATAACTGGGAGGAAAGCAATTGATGACAGTCAAGCTGAAGAGAATGTCCACCTTGTGACATGGTTTCGAAGAATGATGCTGAGCAAGGACAAATTCCGAAAGGCCATTGATCCCGAAATAGATGTCAACAATGAAGAAACTCTAGCCAGCATCAGCACCGTTGCAGAGCTGGCCGGCCATTGCTGCGCTAGGGAGCCACATCAGAGGCCGGACATGGGCCACGCCGTGAACGTGCTGGCGCCTCTCGTGGAGGTGTGGAAGCCTGCAGAATCAAGTTCTGATGACATTAGTGGAATTGACCTTGATATGGACCTTCCACAAGCTCTGAGAAAATGGCAGGCTTTTGAAGGAATGAGCTACACCACCACCATGGGCATGGGTGCTACTTCTTCTTCAGTGTTGGTTTCAAGTGCGGATAGTACACAGTCAAGCATACCCCCAAGACCATTTGGACTCGGAGCTTCTTTCACTTCTTCAGATGGAAGATAA 2817 0.4558 MEKPRSSFGVSFLCRILLIISMVLAARSQDAAVMAILKNSIKGSSLQWSDPDFCKWSHIQCNPAKRVTAIQIGNLYLQGSLPKELSNLTELQRFECQSNSISGAFPSLPSSLQRLFISDNGFTSMPLDFFKGKSALEEIRIDNNPFPPWRIPDTLKDCAALTTFSAQNVSFVGEIPDFFGKDGPFPGLTKLSLCFNQLVGGLPSSFSVSSIELLWVNGQKSTSKLNGTLAVLQNMTSLKQIWIHGNSFTGPIPDLSHHDQLGDVSLRDNQLTGVVPSSLMALRSLQVVNLTNNYLQGPMPAFKSGVRADIDGINQFCTNKPGQPCSSLVNALLSVVEPLGYPLKFAQNWKGNDPCAGDWIGIVCTGGNITVVNFQNMGLSGTISPSFSSFTSVKKLLLANNNLTGTLPQELTSMPLLQELDISNNHIYGVVPTFREGVVLKSDGNPDIGKDKPSAPPGGPSSGNSAGNGKKHHSTVIVVTVVVGVVVLLGVIVWGLVWFHRKRKYSSKTQGQNGVVIHPPHSGDRKHLKISVVGANSGGGTNNGRITSSSNAAGDVHVVEAGGMVISIQVLREATNNFSRENVLGRGGFGTVYLGELHDGTKIAVKRMETGMEGEKGLSEFKAEIAVLTKVRHKHLVALMGYCLDGNERLLVYEYMPQGTLSRHLFNWKDEGLKPLEWTRRLIIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGKASFETRLAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMEMITGRKAIDDSQAEENVHLVTWFRRMMLSKDKFRKAIDPEIDVNNEETLASISTVAELAGHCCAREPHQRPDMGHAVNVLAPLVEVWKPAESSSDDISGIDLDMDLPQALRKWQAFEGMSYTTTMGMGATSSSVLVSSADSTQSSIPPRPFGLGASFTSSDGR 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0111 938 Gene3D Ribonuclease Inhibitor 27 322 IPR032675 -
Lele55g0111 938 FunFam Leucine-rich repeat receptor-like kinase 327 451 - -
Lele55g0111 938 Gene3D Transferase(Phosphotransferase) domain 1 656 873 - -
Lele55g0111 938 Gene3D Ribonuclease Inhibitor 327 452 IPR032675 -
Lele55g0111 938 ProSiteProfiles Protein kinase domain profile. 578 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0111 938 Gene3D Phosphorylase Kinase; domain 1 541 655 - -
Lele55g0111 938 MobiDBLite consensus disorder prediction 442 470 - -
Lele55g0111 938 FunFam receptor protein kinase TMK1 540 655 - -
Lele55g0111 938 SUPERFAMILY L domain-like 44 434 - -
Lele55g0111 938 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Lele55g0111 938 FunFam receptor protein kinase TMK1 656 874 - -
Lele55g0111 938 SMART serkin_6 578 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0111 938 Pfam Protein kinase domain 579 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0111 938 CDD STKc_IRAK 584 858 - -
Lele55g0111 938 FunFam Receptor-like kinase TMK4 28 322 - -
Lele55g0111 938 Pfam Leucine rich repeat N-terminal domain 29 62 IPR013210 -
Lele55g0111 938 Pfam Leucine rich repeat N-terminal domain 330 364 IPR013210 -
Lele55g0111 938 PANTHER OSJNBA0070M12.3 PROTEIN 12 938 - -
Lele55g0111 938 SUPERFAMILY Protein kinase-like (PK-like) 559 863 IPR011009 -
Lele55g0111 938 ProSitePatterns Protein kinases ATP-binding region signature. 584 606 IPR017441 GO:0005524
Lele55g0111 938 MobiDBLite consensus disorder prediction 911 938 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0111 Lele-ChrLele55 687352 690437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0111 67 861 Receptor kinase-like Gene Family AT5G07280 30.336 6.42e-81 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lele55g0111 Pkinase 2e-47 CL0016