Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0104 ATGTTGGCGTTCTTCACTTATCTGTTCCCAGGAGCGGAGATGTCGAGGAGGGCTTCACTGAAGCCATGGCACAGGTTCATAGGGATGGTGATATTCCTGGCAGCAGTGTGCACAGCAGAGATGGGCATTGTTGAACGCTTTGAGTTTCTGAGACTTGGCAGCGACCAGAACGCTCTCATCATCAATTTCTCTGGTTTCTTGCTGTTCCTCTTTGCTGCTACTGTTGGCCTCTCTGTCATTCTCCCCTCATATTACTGA 258 0.4961 MLAFFTYLFPGAEMSRRASLKPWHRFIGMVIFLAAVCTAEMGIVERFEFLRLGSDQNALIINFSGFLLFLFAATVGLSVILPSYY 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0104 85 PANTHER CYTOCHROME B561-RELATED 2 81 IPR043205 GO:0016491
Lele55g0104 85 Pfam Eukaryotic cytochrome b561 2 47 IPR006593 -
Lele55g0104 85 ProSiteProfiles Cytochrome b561 domain profile. 1 80 IPR006593 -
Lele55g0104 85 Gene3D - 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0104 Lele-ChrLele55 638144 638401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0104 3 82 Chloroplast and Mitochondria Gene Families AT5G38630 36.471 4.07e-14 62.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1372 53 21890804 21891734 Lele55g0104 55 638144 638401 hybridization
Lele54g1348 54 18512319 18513233 Lele55g0104 55 638144 638401 hybridization