Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0093 ATGTCAACCTTGACCACTCCTCCTCCAGACACATTTTCGGCTCGTGATGATGTTGCTCGCCTCCGCAAAGCTCTGAAAAAAGGAATCCGATGCAAAACTTCAGTAGTTATAGAAATCCTTGCTCATAGAGACTCAGCGCAAAGAGACCTCATTCTACAGGAATATGAAACTGCACATTCTGAACGCCTTACCAAACGAATCAGTTCTGAGCTTCATGGGAATATCAAGAAAGCACTGCTTCTTTGGATGGAGGAACCTGCCAACAGGGATGCCACCGTGGCAAGGCAAGCCTTGACTTCATCTCTTGTTGATAATCAAGCCATAACCAAAGTGATATGTTCTCGCTCCCCATCACAATTAAGGCGCTTTAAAGAAGTTTATCAGAAAGTATATCATAAAAGTTTAGAGAGGGACATTGAAGACTACCTATCCGGGGATCTCAAGAAGGCTATAAAGAAAGAAGCACATGGCTTTTTTGAAAGGGGCCTCTTGGCCATTCTTCGATGTGCTACTAACCCTGCACTGTACTTCGCCAAGGCATTTTCTCAGTTTTTTCGGACATTTATTATGCCATTCACAGTATTGCAGAACTTAGTGTTCGATAAAAGAAGCATACCTGCAAAAATATGGGAAGCCAGGCCATTAGCCAGTACGGTTCGATCGGACACATCGGGGCATTATAAGGACTTCCTTCTAGCTCTAATAGAGAAAGAAGATATTCGAGGCCCAGATTCTTCTTCAAAGAAAGGAAATGATCTGATAATTGAGGGGTACCCTATTCAGGGTCTGTCCGTTGGAGGCCAAGAAACCTGCATAATTTTCCCCTCGCTTAAGTTAGCTTTTGATATTGGTCGCTGCCCTCCCCGCGCTGTTTGCCAAGACTTCCTCCTTATTTCCCATTCTCACATGGATCACATTGGAGGACTGCCTATGTATGTTGCAACTAGAGGCTTGTACCGTATGAAGCCCCCAACAATTATTGTACCAGTATCCATAAAAGAGGATGTAGAGAGGCTCTTTGAGGTGCATAGGAAATTGGATCACTCGGAACTGAAGCACAATCTGGTTGGCTTGGATGTTGGAGAAGAGTTTTATTTGAGAAACGATATTAAAGTAAAAGCTTTTAATACTTACCATGTGATACCTAGCCAGGGCTATATAATTTACTCTGTAAAGAAGAAGCTTAAACACGAGTACCTTGGCCTTCCTGGAAATGAAATTAAGAAGTTGAAGTTTTCAGGTGTGGAGATAACATACACTTTGGAAGAACCAGAGATTGCTTTCACTGGCGACACTATGGCAGATTTCATAGTTGATGATAGTAACATAGATGCATTGCGAGCCAGGATTCTTGTTATGGAGTGCACCTTTTTGAACGATTCAATTACAGTGACGCATGCCAGGGATTATGGACACACTCATCTGTCTGAGATAATTAGTCATGCTGGGAAGTTGCAAAACCGAGCAATCCTTCTAATTCACTTTTCAGCGCGCTACACAGAAGAGGAAATTCAAGAAGCCATAGCTGCCTTGCCTCCACCATTAGCGGGTCGAACTTACGCACTTACAGAAGGAGTGAATGGAACCTTTAATCCTGTTGATTTGGACTATAATTCGAATTATGAAGTATGTTTAAGCAAGGGCATGATACGTTCCAAATTCATGCATGGCATGTGGCAGGGGGATAGCCCATTCCACAGTGTGCTTCCCGTCACCTTGCTCCAAAGCTTTTTGTTCCTCATCTCCTCCAGGCTCATTTACCTTCTTCTCAGGCCTATTAGAACTCCCAAGCTCGTCTACTCAGTTCTGGCTGGGATTCTTCTAGGACCTTCAGTTACTGGGCACGACAAGGAACTCAGGAATCTACTGTTCCCTCCTATCCAAAACGAGTTCTTGCGGTTCATGGCCTCAATGTCTTCCTCATATTACATCTTCATCGTAGTAATGAAAATGCAGGCGGTTTCGAACCTGAAAAACGCCATAAAAACCTGGAAATTCGGAACAATACCCTTCCTGTGCAGTTTCTGGGTCATGACGGGCCTCTTCTTCCTCCTCGTCCCCCCATGTACCTTCGAAACCGGAACCGGACACCATGCGACGCATCCGCATGATGCTGTGCGTGACAACCTCAATCAGCAGTTTCCCCGTCTTGTTGGAAAGCTTGGTCGAATTGAACTTCTTAACTTCCGAGTTAGGCCACATTGCAATATCTGCAACCGTCGTCAACGAGATTGCTTACTGGGTTTTTATAGGTCTCTCCTCAGTCATGAGCCTCAAATTGCAGAACACAGCAGGGCTCTTGTCTTCTTGCATTGCCTATATATGTTTCTGCGTTTTCGTGATAAAGCCAGCATTGTTGATGATTTCCACGAAGACCCCTGA 2382 0.4433 MSTLTTPPPDTFSARDDVARLRKALKKGIRCKTSVVIEILAHRDSAQRDLILQEYETAHSERLTKRISSELHGNIKKALLLWMEEPANRDATVARQALTSSLVDNQAITKVICSRSPSQLRRFKEVYQKVYHKSLERDIEDYLSGDLKKAIKKEAHGFFERGLLAILRCATNPALYFAKAFSQFFRTFIMPFTVLQNLVFDKRSIPAKIWEARPLASTVRSDTSGHYKDFLLALIEKEDIRGPDSSSKKGNDLIIEGYPIQGLSVGGQETCIIFPSLKLAFDIGRCPPRAVCQDFLLISHSHMDHIGGLPMYVATRGLYRMKPPTIIVPVSIKEDVERLFEVHRKLDHSELKHNLVGLDVGEEFYLRNDIKVKAFNTYHVIPSQGYIIYSVKKKLKHEYLGLPGNEIKKLKFSGVEITYTLEEPEIAFTGDTMADFIVDDSNIDALRARILVMECTFLNDSITVTHARDYGHTHLSEIISHAGKLQNRAILLIHFSARYTEEEIQEAIAALPPPLAGRTYALTEGVNGTFNPVDLDYNSNYEVCLSKGMIRSKFMHGMWQGDSPFHSVLPVTLLQSFLFLISSRLIYLLLRPIRTPKLVYSVLAGILLGPSVTGHDKELRNLLFPPIQNEFLRFMASMSSSYYIFIVVMKMQAVSNLKNAIKTWKFGTIPFLCSFWVMTGLFFLLVPPCTFETGTGHHATHPHDAVRDNLNQQFPRLVGKLGRIELLNFRVRPHCNICNRRQRDCLLGFYRSLLSHEPQIAEHSRALVFLHCLYMFLRFRDKASIVDDFHEDP 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0093 793 Pfam Beta-lactamase superfamily domain 294 495 IPR001279 -
Lele55g0093 793 Gene3D Annexin 85 153 IPR037104 GO:0005509|GO:0005544
Lele55g0093 793 Pfam Annexin 89 151 IPR018502 GO:0005509|GO:0005544
Lele55g0093 793 Pfam Annexin 17 81 IPR018502 GO:0005509|GO:0005544
Lele55g0093 793 Gene3D Annexin 2 84 IPR037104 GO:0005509|GO:0005544
Lele55g0093 793 ProSiteProfiles Annexin repeat profile. 12 84 IPR018502 GO:0005509|GO:0005544
Lele55g0093 793 SMART annex3 103 154 IPR018502 GO:0005509|GO:0005544
Lele55g0093 793 SMART annex3 30 82 IPR018502 GO:0005509|GO:0005544
Lele55g0093 793 Gene3D - 259 514 IPR036866 -
Lele55g0093 793 PRINTS Annexin family signature 94 115 IPR001464 GO:0005509|GO:0005544
Lele55g0093 793 PRINTS Annexin family signature 27 49 IPR001464 GO:0005509|GO:0005544
Lele55g0093 793 PRINTS Annexin family signature 67 83 IPR001464 GO:0005509|GO:0005544
Lele55g0093 793 SUPERFAMILY Metallo-hydrolase/oxidoreductase 275 513 IPR036866 -
Lele55g0093 793 CDD RNaseZ_MBL-fold 253 455 - -
Lele55g0093 793 ProSiteProfiles Annexin repeat profile. 85 168 IPR018502 GO:0005509|GO:0005544
Lele55g0093 793 PANTHER TRNASE Z TRZ1 243 526 - -
Lele55g0093 793 SUPERFAMILY Annexin 5 239 IPR037104 GO:0005509|GO:0005544
Lele55g0093 793 Gene3D - 571 697 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0093 Lele-ChrLele55 587253 595337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0093 542 650 Antiporter Super Family AT5G58460 29.358 2.31e-12 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1380 53 21933819 21942869 Lele55g0093 55 587253 595337 hybridization
Lele54g1357 54 18566605 18569473 Lele55g0093 55 587253 595337 hybridization