Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0090 ATGGTCACTGCTTCCCACCCTCCTGCAGAAAAGTTTTCCATTAACTGTGGCTCCTCCGGCAATTCATACCCTACTTCAGATAACAGAATATGGGAACCAGATGACGCTTCCAAACTACTTTCCCTTTCTCAAAGCAGCCACACCTCCATCGCTTCCGATGCAGTTCAGGTTTCTCCTCCATTGGAGAAAGTTCCTTATGCCACCGCTCGCCTGTCTCATTCTGAATTCATCTACTCCTTTAAGGTCTCCGAAGGCCAAAAGTTTGTTCGCCTTTTCTTTTTCCCAGCCACACATGCCAACTTCGATCGTTCCAATGCTCTCTTCTCCGTTAAAGCAGGCCACCACACCCTCCTCAAGGACTTCAACGCTTCACTCACCGCTGATAACGATGATGATCCCGAGGAAAAAGTGTTCAGAGAGTACTGTGTTAACGTGGAACCCGGTCACAGGTTGAACATCACTTTCACTCCCAGCACCAATCATCCAGACGCCTACGCGTTTATCAATGGGATTGAGGTTGTGGCCATGCCCACCGATCTTTATTACAAAAAAGCTGATGGCCCAGCGTTGAAGCTAGTTGGCAGGAGTAATGGGATTCAAGTTGATAACAACACTGCTCTGGAGACGGTATACAGAATCAATGTTGGAGACAGTGAGATTCCTGCTAACGAAGACACTGATGGTATGCTTCGCGACTGGCATGACGTAACTGGATATGGCTATGAGGTGATGCAAACCTTGCAAGATCTAAAAGATGATTCTGGTGCGAGGCTGATATACCCAAATGAAACTCTCAAAACCGCAGCACCTGAGGATGTCTATTTAACTGCGAAGACCTCTGAAGATACAATGACTTGGGAGATTAAAGTGGACTCCATGTTTGCTTATATGATCAGACTGCACTTCTGTGAGTTGGAAGAGCAAGTCCAGAAGGGAGAAAGAGTTTTTCAGATACTCATAGCTGACACTTTGGCTGAGCCTCAGTTCGATGTGCTTGGTTCGCTGGAAGATAGCCGAGTTTCTCTTTATGAGGACTATGCTGTTTCGTTGAAGCAAGGAAGCTTGATGAAGAGGCAGAACCTTTCAATCAAGTTGCAGAAACTCCCAGAAAGCAAGTACGGTGTCCTATTGAATGGAATTGAAATTTTCAAGATCAGTGATCCTAGTGACAATCTTGGAGGACCCAACCCAGACCCAACCTCTTCACCGACCAAACCATCAAAAATCTCCAAGAAAAATACAAAAACACCCATGGTGATTGCCATTGCGTGTGCAGCTTTAGGTGTCATTATTGTACTATCTGTCATCTGTTGTTTCTTCATATTTCGGCCAAGGACCAGAGGTTCAGGGAAGAAATCATTAGATTTGTGCCATAACTTTTCCATCGCAGAGATCAGAGCCGCCACCAGAGACTTTGAAAAAGGTTCAATCATTGGTCATGGGGGATTTGGTGTGGTCTATAAAGGACACATTAACAAGGGGAAGACATCAACCCCCGTAGCCATCAAACGGCTCAAACCAGATTCACAACAAGGGGTGGATGAGTTCCAGACAGAGATCAAGATGCTGTCCCAGTTTCGCCATCGTCACTTGGTTGATCTCATTGGCTACTGCAATTATGACAAGGAGATGATCCTGGGGATCATAAAACCTCAGTGTCTAAATAAGTTTGTTCAAACAGCATTGGCTTGTCTGCGTGATAACGGTAAACTTCGGCCGACGATGAGAGATGTTGCGAGGGAGTTAGAGACTGTGTTGTGGATGCAGGGAAGCATGGAGGTTGAGATCCCAAGAGATAATGGTGGAAAGGTAAAGAATGAGGACAAAGCAACTCGGACTCAATTTAAAGGAGATGTAGAAAGTGGAGTACAGTTCTCGACTTCAGTTGGATCCACCGCGACTGAGTCCAAGGGCAGCAGTAAGGTCACCCTCTCAAGTAGTGAAGAGGAGCAAACTCTGGTTCCTGCAGGGGTGTTCTCTGAGCTTGCACATCCAACAGCACGTTAA 2007 0.4609 MVTASHPPAEKFSINCGSSGNSYPTSDNRIWEPDDASKLLSLSQSSHTSIASDAVQVSPPLEKVPYATARLSHSEFIYSFKVSEGQKFVRLFFFPATHANFDRSNALFSVKAGHHTLLKDFNASLTADNDDDPEEKVFREYCVNVEPGHRLNITFTPSTNHPDAYAFINGIEVVAMPTDLYYKKADGPALKLVGRSNGIQVDNNTALETVYRINVGDSEIPANEDTDGMLRDWHDVTGYGYEVMQTLQDLKDDSGARLIYPNETLKTAAPEDVYLTAKTSEDTMTWEIKVDSMFAYMIRLHFCELEEQVQKGERVFQILIADTLAEPQFDVLGSLEDSRVSLYEDYAVSLKQGSLMKRQNLSIKLQKLPESKYGVLLNGIEIFKISDPSDNLGGPNPDPTSSPTKPSKISKKNTKTPMVIAIACAALGVIIVLSVICCFFIFRPRTRGSGKKSLDLCHNFSIAEIRAATRDFEKGSIIGHGGFGVVYKGHINKGKTSTPVAIKRLKPDSQQGVDEFQTEIKMLSQFRHRHLVDLIGYCNYDKEMILGIIKPQCLNKFVQTALACLRDNGKLRPTMRDVARELETVLWMQGSMEVEIPRDNGGKVKNEDKATRTQFKGDVESGVQFSTSVGSTATESKGSSKVTLSSSEEEQTLVPAGVFSELAHPTAR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0090 668 Pfam Malectin-like domain 14 385 IPR024788 -
Lele55g0090 668 MobiDBLite consensus disorder prediction 393 411 - -
Lele55g0090 668 MobiDBLite consensus disorder prediction 388 411 - -
Lele55g0090 668 ProSitePatterns Protein kinases ATP-binding region signature. 478 503 IPR017441 GO:0005524
Lele55g0090 668 MobiDBLite consensus disorder prediction 597 668 - -
Lele55g0090 668 Gene3D Phosphorylase Kinase; domain 1 445 547 - -
Lele55g0090 668 FunFam FERONIA receptor-like kinase 11 177 - -
Lele55g0090 668 PANTHER OS03G0124300 PROTEIN-RELATED 7 448 - -
Lele55g0090 668 FunFam receptor-like protein kinase FERONIA 443 548 - -
Lele55g0090 668 ProSiteProfiles Protein kinase domain profile. 472 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0090 668 Pfam Protein tyrosine and serine/threonine kinase 474 561 IPR001245 GO:0004672|GO:0006468
Lele55g0090 668 Gene3D - 11 177 - -
Lele55g0090 668 Gene3D - 205 386 - -
Lele55g0090 668 MobiDBLite consensus disorder prediction 617 653 - -
Lele55g0090 668 MobiDBLite consensus disorder prediction 598 615 - -
Lele55g0090 668 SUPERFAMILY Protein kinase-like (PK-like) 453 546 IPR011009 -
Lele55g0090 668 SMART tyrkin_6 472 653 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0090 Lele-ChrLele55 566015 568522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0090 531 668 Receptor kinase-like Gene Family AT3G51550 28.571 5.54e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele55g0090 Malectin_like 1.6e-39 CL0202