LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele55g0080	ATGGGGGTTTTCGATCTGTACGCGCTGCTTTCCTTTTGTTTCTTGTCTGTTTGGCTGCTAGGAAAATGTAGGAATCGTGACGATTTTCAGATCTTTAACTTTCCGCTCTTTGTTCTCATGGACGATGATGCGTTGAACATGCGCAATTGGGGTTACTATGAACCCTTCAAAGGGGGGCATCTAGGCCTCCAGCTCATGTCTAGTATGACAGAACGAGACACCAAGCCATTTATGCCAGGCCGTGATCCTACTATGTTAGTTAGTCCAAATGGAAGCTTCCACCCCCGGGATTGCGTTGTTTCAGAAGCCTCAATTCCAATTAACTACGTTAGGGACAGTTGGATCAGCCAGAGAGACAGGTTTCTCAATATGTTGCCCACAAATCCTAATTATGCCGTTCTTCCAGAAACATCAGGAGCGCCTTCCTTGCAAATCATACAGCCACCTGAAACATCGAGAAATGAAAGGGTGAATCAAGTTGAAGACCCTCCTGTTAAAAAGGAAGTTGGCCAATTGAAGAAAAGGCGTTGTGGGGGTGCTCCAAAGACTCCAAAAGCTAAAAAGCCAAGGAAGCCAAAGGATAATAGCAATGCTTTGGTTCAACGTGAGAAGCCAGCAAGGAAGGCTATGGAGGTTGTGATAAATGGAATTGATATGGACATTTCGGGTCTACCCATTCCTGTTTGCTCGTGTACTGGGGCTCCTCAGCAGTGTTATCGATGGGGCTGTGGTGGTTGGCAATCAGCTTGTTGTACCACAAATGTGTCAATGTATCCATTGCCAATGAGCACCAAAAGGCGTGGTGCAAGGATAGCTGGACGGAAAATGAGTCAAGGTGCTTTTAAGAAGGTTTTGGAAAAACTTGCAGCTGAAGGATATAATTTTGCTAATCCTATTGATCTGAGGACTCACTGGGCTAGGCATGGCACCAACAAGTTCGTCACTATCAGGTAA	954	0.456	MGVFDLYALLSFCFLSVWLLGKCRNRDDFQIFNFPLFVLMDDDALNMRNWGYYEPFKGGHLGLQLMSSMTERDTKPFMPGRDPTMLVSPNGSFHPRDCVVSEASIPINYVRDSWISQRDRFLNMLPTNPNYAVLPETSGAPSLQIIQPPETSRNERVNQVEDPPVKKEVGQLKKRRCGGAPKTPKAKKPRKPKDNSNALVQREKPARKAMEVVINGIDMDISGLPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRTHWARHGTNKFVTIR	317

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele55g0080	317	SMART	GAGA_bind_2	40	317	IPR010409	-
	Lele55g0080	317	MobiDBLite	consensus disorder prediction	155	175	-	-
	Lele55g0080	317	MobiDBLite	consensus disorder prediction	141	201	-	-
	Lele55g0080	317	PANTHER	-	40	317	IPR010409	-
	Lele55g0080	317	Pfam	GAGA binding protein-like family	40	317	IPR010409	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele55g0080	Lele-ChrLele55	513081	514367	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele55g0080	40	317	BBR or BPC Transcription factor family	AT2G01930	58.389	7.15e-109	316

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	BBR-BPC	Lele55g0080		GAGA_bind	1.6e-111	No_clan