Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0060 ATGGCGCCGAAACGTGCTTCTCCTTTGGACGAACCACCCTCAGCTTCTTCTTCATCCGAAGAAGAAGAGGAAACTTCATCAGAAGTAGGTTCTTCATCTGAAGAGGAGGACGATCAACCTGCAAAACCCCCACAACCCCTCTCTACCGAGAAGTCTGCTGCCAAAAAGCCACCACCTGCTGCTCCGGTCGCAAAATCTCAACCTAAAGCTTCGGTGTCAAAATCTGAGACAGAATCTGATGCCGGATCTGACTCCGATGATGAGCGCCCCAGTGAGAAGACGGATCTGATTGTCCAGCCCGTTGCCTCCAAGCCTAAAGAAGAGACGCCCAAAGCAAAGAAGTGGAAGTCTCAGACATCCGTTACGCCGGCCAAAGCAGCGAACAAGCGACCGAGTGACAACAGCCGGCCGGTCAGTGACTCGAAGAAGGCGAAGAAGGGGAAGGATGCTGTGGGAAATGATGAGATCCCGGTGGCAGAGGATGACGGTAAAAAAGCTGGGGATGAGTCCAAGAAGCTTTTTCAGAGACTGTGGAGTGAGGATGATGAGATTGCTATCCTCACTGGTTTAGCGGAATATGCAGCGAAGACCGGAGAAGCCCCAATTAAGGATATTAATGGATTTCACGATTTCATAAAGAAGTCGGTCCATGTGGATGTTTCAAACGATCAATTGGCGAATAAGATTCGGACTTTGAAGAGAAAGTACGTGAAGAATGCTCAAAGAGGGAAAAATGGCGAATGCCCTAGTTTTTCGAAACCATACGATAAGAAAGTCTTTGAATTGTCAAAGAAGATCTGGGCTGATGAAGGAGTCAATGGAGGAATGGACCTTACAAAGTCCAATGGGAAAGTGAAGAAAAATATGAAGGAAGGTAGCAGTGTCGTGGCTTTTCAGAAACCAGTGGCTGATCTGGTTTCAAATTCGAAGGTAGCTAGAAAGGTTGACGTTGATCAGAATGCAGGTTCGCTGCTTAGTTTAAGTGAAATGATTAGGTTCAACAAAAGTCTGGGTCTGTCAGGTTTGGATGATGATGCTATTAAGAGGGGATATGAATTGATTGGAGCATCCAAGAAGGCAGAGTTGGAGGACAGGTGGAAGAAACTGCAAATTGCAGAGTTGGAGCTGTTTGTGAAACGAGTCGAGCTTGTCAAGGATGAGGCTAGTTTGATATGGGAGGCAACCAAATCTTCAGGCAATTAG 1203 0.4688 MAPKRASPLDEPPSASSSSEEEEETSSEVGSSSEEEDDQPAKPPQPLSTEKSAAKKPPPAAPVAKSQPKASVSKSETESDAGSDSDDERPSEKTDLIVQPVASKPKEETPKAKKWKSQTSVTPAKAANKRPSDNSRPVSDSKKAKKGKDAVGNDEIPVAEDDGKKAGDESKKLFQRLWSEDDEIAILTGLAEYAAKTGEAPIKDINGFHDFIKKSVHVDVSNDQLANKIRTLKRKYVKNAQRGKNGECPSFSKPYDKKVFELSKKIWADEGVNGGMDLTKSNGKVKKNMKEGSSVVAFQKPVADLVSNSKVARKVDVDQNAGSLLSLSEMIRFNKSLGLSGLDDDAIKRGYELIGASKKAELEDRWKKLQIAELELFVKRVELVKDEASLIWEATKSSGN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0060 400 MobiDBLite consensus disorder prediction 115 134 - -
Lele55g0060 400 PANTHER BNAANNG10740D PROTEIN-RELATED 12 389 IPR007592 GO:0006355
Lele55g0060 400 MobiDBLite consensus disorder prediction 16 34 - -
Lele55g0060 400 Pfam Protein of unknown function, DUF573 174 267 IPR007592 GO:0006355
Lele55g0060 400 MobiDBLite consensus disorder prediction 135 169 - -
Lele55g0060 400 MobiDBLite consensus disorder prediction 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0060 Lele-ChrLele55 393813 395015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0060 4 397 GeBP Transcription Factor Family AT1G61730 32.331 2.07e-44 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lele55g0060 DUF573 7.1e-33 CL0123