Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0050 ATGTCTCAGACATCTGGGCTACTCCCTGCTTTCCAGTCTCTCGAACCAGTGCAACCTAATGTCAAGTTCGCAGCTGATCCAACACTTATTTTTGTGGAAAAACATGAAAACGGTGCACTAGGAAGGGAGGCATCTGAGGAAGTTCAAGAACTTGCTGGTGATATGGATCTTCTTGACGAGGATTCGCCATATGGTGAAAGAACTGCATCATTAGAAAGCAGGCCTTCAGCTGGTGATGATGGCACAGAATCTGCTCCTCAGCCACTCCCCTCAATCTCCCCATCGTCCAGTGACCACCGGTGGAGTGATACAACACCTTATGCTTCAAAGAAGAAGATTCATTCTTGGTATCAACTTCCAAATGGGAATTGGGAGCTGGGGAAGATAATATCCACTTCTGGGACTGAATCTGTTATCACATTGCCTGATGGAAAAGTTTTAAAGGTTAAAGCTGAAAGTTTGATTCCGGCAAACCCTGATATTCTTGATGGAGTGGATGACCTCATGCAGCTCAGTTATTTGAATGAACCATCAGTTTTATACAATCTGCAATATAGATACAACCGAAATATGATTTATACAAAAGCAGGGCCCGTTTTGGTTGCAATAAACCCGTTTAAGAAAGTCCCTCTGTATGGAAATGATTATATTAAAGCATACAAGAATAAAGCTATGGAAAGCCCTCATGTATATGCCATTACAGACACAGCCATCAGGGAAATGATAAGAGATGAAGTGAATCAATCTATAATTATAAGTGGTGAAAGTGGAGCAGGAAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCCGCCCTTGGAGGTGGAAGTGGAATAGAGTATGAGATATTAAAGACTAATCCAATACTGGAAGCCTTTGGCAATGCAAAAACATTGAGGAATGACAACTCAAGTCGTTTTGGGAAACTTATTGAGATTCACTTCAGTGAAACTGGAAAAATATCGGGTGCTAATATTCAAACATGTAAGTTTACTGCCGCATTTGTGGTTAAAACACTATCTCTGACTCCGTTTGAAGTTTCTAACCATTATGTTTCTATTCACATGTCGAATCTATGTTGTGTTCCCTGCATAAGCATAAACAGTTTTGCTAGAAAAGACGAGACAGAAAGTTCCCCAGAAGCCTTGGATGTTGTCCACATCAGCAAAGAAAATCAGGAGAATGTATTTGCAATGCTTGCGGAAGTGTTATGGCTGGGGAACATATCATTTACTGTGATTGATAATGAAAATCATGTCCAACCCGTAGAAGATGAAAGTTTGTTCAACGTTGCTAAATTGATTGGCTGTGACATTGGAGACCTGAAGTTGACTTTATCAACTCGCAAAATGAAAGTTGGTAACGACAACATTGTCCAGAAGTTAACGCTGTCACAGGCAATTGACGCAAGAGATGCTTTGGCAAAGTCTATATATGCATGTCTATTTGATTGGCTGGTTGAACAAATAAACAATTCACTTGCTGTTGGTAAAAGACGCACTGGTAGATCGATCAGTATTTTAGACATCTATGGGTTTGAATCTTTTGAGAAGCCACTGGGGTTACTATCCCTTTTAGATGAGGAGTCCACTTTCCCAAATGGTACAGATTTGACATTTGCTAACAAGCTTAGACAGCATCTGAATTCAAATTCATGTTTCCAAGGAGAACGAGGCAAAGCCTTTGCTGTGAGTCATTATGCAGGGGAGGTCGCCTATGATTCAACTGGATTTTTGGAGAAGAACAGGGACCTATTGCACTCGGATTCCATTCAACTTTTATCCTCATGTACATGCCATCTTCCTCAGCAATTTGCAGCCCATATGCTTTTGCAGTCCGAGAAGCCTGTAGTTGGTCCCTTACACAAGTCAGGTGGAGCAGATTCCCAAAAGCTAAGTGTTGCCACAAAATTCAAGGGTCAGCTGTTTCAACTGATGCAACGTTTGGAGAGCACCACACCGCATTTTATTCGATGCATTAAGCCTAATAACTTCCAGTCACCAGGATCATATGAGCAAGGGCTTGTCCTCCAGCAACTGAGATGTTGTGGAGTCCTGGAAGTGGTTCGAATATCAAGATCAGGTTTTCCTACTAGAATGTCTCATCAAAAGTTTGCCAGAAGATATGGTTTTCTTCTCCTTGAAAATGTTGCATCTCAGGATCCACTCAGTGTTTCAGTTGCAATTCTACATCAGTTTAGTATTATGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAACAGGACAGATTGGAGTGCTGGAAGATACTAGAAATCGTACCCTCCATGGCATCTTACGTGTCCAAAGTTGCTTCAGGGGTCACCGAGCACGTTGTTACCACAAGGAGCTTAAGAGAGGAATCACTACACTCCAGTCATTTGTTAGGGCAGAGAAAACAAGAAAGGAATATGCAGATTCACTTCGGCGACATAGAGCTGCGGTTCTTATACAGAAGTATATGAAAACAGTATTTGCGAGAAACAGAATGAAGAATATCTGCGACGCTTCGATAGCCATTCAATCAGCTATCCGTGGTTCGTTGGCCAGAAGATGCTCAGGAGATATGGGATTGTTGAAATCGATAGGGATGAAGACGAATGAGTCAGACGAAGTACTAGTCAAGGCTTCTTTCCTGACCGACTTACAGCGTCGGGTACTCAAGGCTGAAGCTGCTCTCAGAGTGAAAAAAGAGGAAAATGACATTCTTAACCAGCGTCTCCAACAGTATGAGAGCCGTTGGTCTGAGTATGAATCGAAGATGAAATCAATGGAAGAAGGGTGGCAGAAACAAATGAGATCCCTACAATCTAGCCTCTCCATTGCAAAAAAGAGCTTAGCAATCGATGATTCTGCAAGAAATTCGGATGCTTCTGTGAATGCAAGTGATGATAGAGATTACAGTTCAGATATAGGAAGCCACCATAGGCGCCAAGAAAGCAGCTCAAGTGTAGGAAATTATCACAGACGCCAAGAAAGCAATGGGTTTAGATCAATGGGTGCAGGTTTGAACGTCACAAGTGGGTTGGCTCATGAATTGGAGCAGAGGCGTCAAGTATTTGGCGACGATGCCAAGTTCTTGGTTGAGGTGAAATCTGGTCAAGTTGAAGCAAGTTTGAATCCAGAACAGGAGCTTAGAAGCTTGAAACACACGTTTGAAGCTTGGAAGAAAGATTATGCGGAAAGACTGCGTGAGACAAAGGCAATTTTACACAAGCTTGGAAGTGAAGAAGGTGGAATTGACAAAGTGAGGAAAAGGTGGTGGGGAAGAAGGAACAGTACGAGGTTTAGTTGA 3306 0.4217 MSQTSGLLPAFQSLEPVQPNVKFAADPTLIFVEKHENGALGREASEEVQELAGDMDLLDEDSPYGERTASLESRPSAGDDGTESAPQPLPSISPSSSDHRWSDTTPYASKKKIHSWYQLPNGNWELGKIISTSGTESVITLPDGKVLKVKAESLIPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNRNMIYTKAGPVLVAINPFKKVPLYGNDYIKAYKNKAMESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTCKFTAAFVVKTLSLTPFEVSNHYVSIHMSNLCCVPCISINSFARKDETESSPEALDVVHISKENQENVFAMLAEVLWLGNISFTVIDNENHVQPVEDESLFNVAKLIGCDIGDLKLTLSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINNSLAVGKRRTGRSISILDIYGFESFEKPLGLLSLLDEESTFPNGTDLTFANKLRQHLNSNSCFQGERGKAFAVSHYAGEVAYDSTGFLEKNRDLLHSDSIQLLSSCTCHLPQQFAAHMLLQSEKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENVASQDPLSVSVAILHQFSIMPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGHRARCYHKELKRGITTLQSFVRAEKTRKEYADSLRRHRAAVLIQKYMKTVFARNRMKNICDASIAIQSAIRGSLARRCSGDMGLLKSIGMKTNESDEVLVKASFLTDLQRRVLKAEAALRVKKEENDILNQRLQQYESRWSEYESKMKSMEEGWQKQMRSLQSSLSIAKKSLAIDDSARNSDASVNASDDRDYSSDIGSHHRRQESSSSVGNYHRRQESNGFRSMGAGLNVTSGLAHELEQRRQVFGDDAKFLVEVKSGQVEASLNPEQELRSLKHTFEAWKKDYAERLRETKAILHKLGSEEGGIDKVRKRWWGRRNSTRFS 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0050 1101 Pfam Myosin head (motor domain) 519 751 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele55g0050 1101 Pfam Myosin head (motor domain) 165 329 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele55g0050 1101 ProSiteProfiles IQ motif profile. 767 794 IPR000048 GO:0005515
Lele55g0050 1101 MobiDBLite consensus disorder prediction 956 992 - -
Lele55g0050 1101 Gene3D - 519 653 - -
Lele55g0050 1101 PANTHER MYOSIN 156 519 - -
Lele55g0050 1101 Gene3D Myosin VI head, motor domain, U50 subdomain 392 518 - -
Lele55g0050 1101 Pfam IQ calmodulin-binding motif 790 808 IPR000048 GO:0005515
Lele55g0050 1101 Pfam IQ calmodulin-binding motif 769 786 IPR000048 GO:0005515
Lele55g0050 1101 Pfam IQ calmodulin-binding motif 840 855 IPR000048 GO:0005515
Lele55g0050 1101 MobiDBLite consensus disorder prediction 86 105 - -
Lele55g0050 1101 Gene3D Kinesin motor domain 158 391 IPR036961 -
Lele55g0050 1101 SMART MYSc_2a 157 764 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele55g0050 1101 Gene3D Kinesin motor domain 654 692 IPR036961 -
Lele55g0050 1101 PRINTS Myosin heavy chain signature 289 316 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele55g0050 1101 PRINTS Myosin heavy chain signature 193 212 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele55g0050 1101 PRINTS Myosin heavy chain signature 505 533 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele55g0050 1101 PRINTS Myosin heavy chain signature 247 272 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele55g0050 1101 Gene3D - 696 764 - -
Lele55g0050 1101 Gene3D - 767 815 - -
Lele55g0050 1101 Gene3D - 816 857 - -
Lele55g0050 1101 Gene3D Myosin VI head, motor domain, U50 subdomain 586 631 - -
Lele55g0050 1101 ProSiteProfiles Myosin motor domain profile. 163 763 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele55g0050 1101 MobiDBLite consensus disorder prediction 971 987 - -
Lele55g0050 1101 SMART iq_5 787 809 IPR000048 GO:0005515
Lele55g0050 1101 SMART iq_5 813 835 IPR000048 GO:0005515
Lele55g0050 1101 SMART iq_5 836 858 IPR000048 GO:0005515
Lele55g0050 1101 SMART iq_5 764 786 IPR000048 GO:0005515
Lele55g0050 1101 MobiDBLite consensus disorder prediction 956 970 - -
Lele55g0050 1101 MobiDBLite consensus disorder prediction 36 105 - -
Lele55g0050 1101 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 110 159 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele55g0050 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 808 IPR027417 -
Lele55g0050 1101 Coils Coil 883 931 - -
Lele55g0050 1101 ProSiteProfiles IQ motif profile. 788 817 IPR000048 GO:0005515
Lele55g0050 1101 CDD MYSc_Myo8 177 751 IPR036022 -
Lele55g0050 1101 ProSiteProfiles IQ motif profile. 839 865 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0050 Lele-ChrLele55 342702 352695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0050 10 1100 Myosins gene family AT1G50360 66.751 0.0 1531