Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0043 ATGGAGAATCACACCGCCAACAACACCAAAGCAGTTCCAGGAGGAGCCAAACCCATCAATGACAACGAAGAGCGTTCCAATTTGAATGAACCGGAGAACACAGAAGAAGTGGATGTAGATGAGAATGGAGGTGCGGATGAAGAAGATGGAGAAAGAACTGGATCTGGCTCCATCCAGTCTCCTCATCGCCCCCCTTCCAGAACCCCTTTCACTAATCTCAGTCAGGTCGATGCTGACCTCGCCCTTGCTCGAACCCTTCAGGAGCAGGAAAGGGCATACATGATGCTGAGAATGAACAACGAAGGAAGTGATTATGGAAGTTGGGAAGCTAGCAGCTATTTGCATGATGATGGGGATGATTTTGAAGATCTACATGATGGTACTGATGATGATGAAGATGACGATGAAGAAGAAGAAGATGCATTTGATGCCCACGCTCATGGTAGTTCTGGTGAAATTGATAATACCAGAATTGAATTTGACCCTCATGTATTCTCAAGTGATGAAGCATATGCAAGAGCATTGCAAGAGGCTGAAGAGAGGGAAATGGCGGCTAGGCTATTCACTATGGCTGGGATAAACGATCGGGAAGCTGAGGACACAGAAGACCATGGTGTTAATTCTCAGGATGCATGGGAGGATGTTGATCCTGATGAACTTTCATATGAGGATGGTGAATCCTTGACTGCACTTTCTTGCAAACATTTGTACCATCCTGAGTGCATTAACAATTGGTTGAAAATAAACAAGTGTTTATTGATTGTTAAATGCTGCATTATGGAGACAAATTGTACAAGTTGGGAAGCTACTTTCCCTTTTCTTGGTAGCTTGCATGCCTTGTGGGGGGAAGTAGTGTATGCTTCATTGGATCCAAGCTGTTTCGGTTTTAAATGTAATATCGAAACTTTGGAATTAAATTACTGGATTGTATATGCCTTTGGTAATGGAATGATTGGCATGAAAGCCAATTCTTTCTCCATCATTTCTTTTATTTTGTCGAGAGCTGAGGGGATCAGTAATTCACTATTTAAGTTTAATGGTTTAGCTCTAAAGGGATTTCTTCTCTCAATTTGGTTAGGGAAGATAACAGATAATACAGGCGTTATTGGGGATTCATTTCCTACTTCCACCAACGCATATGGCAAAACTCAACACTTGAACCTTGGCGTGGCAACCCATCCAAGTTGA 1188 0.4259 MENHTANNTKAVPGGAKPINDNEERSNLNEPENTEEVDVDENGGADEEDGERTGSGSIQSPHRPPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWEASSYLHDDGDDFEDLHDGTDDDEDDDEEEEDAFDAHAHGSSGEIDNTRIEFDPHVFSSDEAYARALQEAEEREMAARLFTMAGINDREAEDTEDHGVNSQDAWEDVDPDELSYEDGESLTALSCKHLYHPECINNWLKINKCLLIVKCCIMETNCTSWEATFPFLGSLHALWGEVVYASLDPSCFGFKCNIETLELNYWIVYAFGNGMIGMKANSFSIISFILSRAEGISNSLFKFNGLALKGFLLSIWLGKITDNTGVIGDSFPTSTNAYGKTQHLNLGVATHPS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0043 395 MobiDBLite consensus disorder prediction 54 75 - -
Lele55g0043 395 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 171 265 IPR013083 -
Lele55g0043 395 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 222 258 IPR043312 -
Lele55g0043 395 MobiDBLite consensus disorder prediction 197 211 - -
Lele55g0043 395 MobiDBLite consensus disorder prediction 122 141 - -
Lele55g0043 395 MobiDBLite consensus disorder prediction 1 75 - -
Lele55g0043 395 MobiDBLite consensus disorder prediction 101 155 - -
Lele55g0043 395 SUPERFAMILY RING/U-box 222 257 - -
Lele55g0043 395 MobiDBLite consensus disorder prediction 197 219 - -
Lele55g0043 395 MobiDBLite consensus disorder prediction 33 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0043 Lele-ChrLele55 311462 315904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0043 51 209 C3H Transcription Factor Family AT3G19910 50.299 1.29e-36 132