LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele55g0021	ATGTACCTTAGGAGAATACAATGTCGAGATTGGAGGTGGGGCGTTTCGTTTCAGCCGTCCAAATACTTTATTTGGCCAAGATGCTTTGGTTATGCATGCTTTCAATCTCAGTTCCCTAAGAATAAGGTGGAAGAATGTGTTTCGCATGATAGCATAATAAGGAGACGTCTATTGGAATCTTTTTTATCTAGGGTGGCATCATCTAATAATAGTTGTACTGATCTGAACAGAAGGCCTAGTTTATATTTGAGAAGTACTCTGGTACGCTTCTACAGTTCTGAAAGTGATGGAAGGAATGCAAGTGAGGATAAACATGTAAATGCAAATGATGGAGCTCACTGTGATAAGGGAAAAAACTGGCAAGATAAGTTTGGGGAAGATTCCAAACTCTGTAACGCTCATGCTCGACTTGGGGAACAGGATCAAGAGGATTGGCTCAAAAATGAGAAGATTTCCATTGAAAATAAAAAAAGAGAGTCACCCTTTTTAACCAGAAAGGATAAGTTCAAAAATGAGTTTCTGAGAAGGGTTGTTCCTTGGGAGAAAATAAACATTTCGTGGGACACATTTCCTTACTATATTCATGAGAATACCAAAAATCTTCTGGTGGAATGTGCTGCTTCTCATTTGAGACATGATAAAGTTGCCTCTTCTTATGGCGCTGGCCTCTCATCTTCAAGCGGGAGAATATTGCTTCAGAGCGTTCCTGTTAGAGCACTTGCACAAGATCTAAAAGTCCCTTTGCTGGTGCTTGATAGCAATATCCTTGCTCCTTATTATATCGATGATGACTTATCATCATCAGAATGCGAGTCTGATGATGATAATCCAGAATCTGGGGAGGAGGCTTCTCTGGAGTCAGAGGATGATGATAACGATACAAGCAATGAAGAAGAGTGGACTAGCAGTACTGAGGCAAAGTCAGATTCTAGTGATAACGAAGAACGTGATGCAATAGCAACTGCTGAAGCAGCCTTAAAGAAGGTGAAAGCTGCTGTCGAGAAACTTGTTCCCTACAACATTGAAGACTTTGAAAAGGTGTCTATATGGTCATCTGAAGATTCAGAAAATTACGAGTCAATCAAATCTGAGGTTGTGAAGCCTTCTGACCAATGTGGATGCCAGTTAAAGAAAGGTGACCGTGTGAAATACATTGGGCCATCTGTTCAAATGAAAGCCAACAATAGGATCATACTGGGGAAGATACTGACATCTGATGGTCCAACTAATGCTTACACTAATATCCATGGCAGGTGGGTTGGCAGTAAAGTATTAATGCATCATGAACAGATCGGTTTACTTAATGGTTGGGGTAGATGGCTTTGGCGATGTCCTTTAAAACCTAGCATTGCTAGTCATGCTAGCATTTTAAAGTGCTTTTCTATGATGTATCTCTCCTTTAGTCCTCTGATTACTTCTGAAGTTAGGGATGAGTCTAGGCTTAGATCTTTGTTCAATGGTCAACGGGGAGAGGTATATGGGGTGGAAGGGGATCAAGTTGCTGTCATCATGGACATTACGGAAGAGAATACAAAGGAGGGTGAGGTGGAGAAATCTAATGAACATACAGAATCACGACTTTGTTGGATACATGTTAAGGACATTGAGCATGATCCTGATGCTCAATTACAGGATTGCTACATAGCTATGGAAGCTCTGTCCGAGGTTTTGGATTCCAAACAACCTCTTATTGTCTATTTTCCAGACAGTACACAGTGGTTTCATAAATCAGTCCTGAAGTCAAACCGAAAAGAGTTCTTTCACAAGGTTCAAGAAATGTTTGACAAGTTGTCTGGTCCAGTTGTGTTGATCTGTGGACAAAACAAAATTCAATCAGGATCAAAAGAGAAAAAGCAATTTCCTCTTTCTCTGAAACACTTGACTGAGGGACTTGGAGCAACAAAGAGATCGGATGATGATGAAATCCACAAGCTTTTCACTAATGTTTTGTGTATACATCCACCCAAGGAGGAGGATCTTCTTGAAACTTTTAAAAAACAACTTGAGGAAGACAGGAAAATTGTGATTTCACGTAGTAGTTTGAATGAACTACATAAGGTATCGTTCCACTTAATGCACTTGGTATCATCAATATCAGACAATAATAGTTGGATTTTCATGTTGCAGGTTCTTGAAGAACATGAGCTATCATGCTTGGACCTCTTGCAAAACCTTGCAAAGGATGAGTACGAGAGCAACTTTATTTCAGCTGTAGTACCTCCTGGTGAAATTGGGGTGAAGTTTGAGGACGTAGGTGCTCTTGAAGACGTGAAGAAGGCACTTAATGAACTTGTCATCCTTCCGATGAGAAGGCCTGAGCTTTTCTCTCTTGGAAACTTGTTACGGCCTTGTAAAGGAATATTACTTTTTGGTCCTCCTGGCACTGGGAAAACTCTTCTGGCCAAGGCACTTGCAACAGAAGCAGGCGCAAATTTTATCAGCATAACTGGTTCAACTCTAACATCAAAGTTTATATGTAAAGCAATTTTGAGGATAATATCTCACCCTCCATTCATTCATGACTTTGTTTGGAAGAGCCTCTGCATTGCTGCGGCATATAGGCCTGTTCAAGAGCTCCTAGAGAATGAAAAGAAGTCGAGCTACAGTGATCCAACACCGGCATTAAGACCTCTAAAATTGGATGATTTTATTCAGGCAAAATCTAAGGTTGGGCCATCAGTCGTCTACGATGCAGCGAGCATGAATGAGTTGAGGAAGTGGAGTGAAATGTACGGAGAAGGTGGAAGTAGGACAAAATCTCCATTTGGATTTGGAAGCTGA	2781	0.4074	MYLRRIQCRDWRWGVSFQPSKYFIWPRCFGYACFQSQFPKNKVEECVSHDSIIRRRLLESFLSRVASSNNSCTDLNRRPSLYLRSTLVRFYSSESDGRNASEDKHVNANDGAHCDKGKNWQDKFGEDSKLCNAHARLGEQDQEDWLKNEKISIENKKRESPFLTRKDKFKNEFLRRVVPWEKINISWDTFPYYIHENTKNLLVECAASHLRHDKVASSYGAGLSSSSGRILLQSVPVRALAQDLKVPLLVLDSNILAPYYIDDDLSSSECESDDDNPESGEEASLESEDDDNDTSNEEEWTSSTEAKSDSSDNEERDAIATAEAALKKVKAAVEKLVPYNIEDFEKVSIWSSEDSENYESIKSEVVKPSDQCGCQLKKGDRVKYIGPSVQMKANNRIILGKILTSDGPTNAYTNIHGRWVGSKVLMHHEQIGLLNGWGRWLWRCPLKPSIASHASILKCFSMMYLSFSPLITSEVRDESRLRSLFNGQRGEVYGVEGDQVAVIMDITEENTKEGEVEKSNEHTESRLCWIHVKDIEHDPDAQLQDCYIAMEALSEVLDSKQPLIVYFPDSTQWFHKSVLKSNRKEFFHKVQEMFDKLSGPVVLICGQNKIQSGSKEKKQFPLSLKHLTEGLGATKRSDDDEIHKLFTNVLCIHPPKEEDLLETFKKQLEEDRKIVISRSSLNELHKVSFHLMHLVSSISDNNSWIFMLQVLEEHELSCLDLLQNLAKDEYESNFISAVVPPGEIGVKFEDVGALEDVKKALNELVILPMRRPELFSLGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKFICKAILRIISHPPFIHDFVWKSLCIAAAYRPVQELLENEKKSSYSDPTPALRPLKLDDFIQAKSKVGPSVVYDAASMNELRKWSEMYGEGGSRTKSPFGFGS	926

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele55g0021	926	MobiDBLite	consensus disorder prediction	266	316	-	-
	Lele55g0021	926	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	745	824	IPR027417	-
	Lele55g0021	926	MobiDBLite	consensus disorder prediction	266	298	-	-
	Lele55g0021	926	PANTHER	AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED	844	919	-	-
	Lele55g0021	926	MobiDBLite	consensus disorder prediction	300	316	-	-
	Lele55g0021	926	Pfam	ATPase family associated with various cellular activities (AAA)	787	826	IPR003959	GO:0005524\|GO:0016887
	Lele55g0021	926	CDD	AAA	785	825	-	-
	Lele55g0021	926	Gene3D	-	745	823	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele55g0021	Lele-ChrLele55	171733	182347	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele55g0021	746	825	Calmodulin-binding Proteins	AT3G56690	45.679	4.41e-12	68.6