Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0013 ATGCTCCAAACCCTAAACAAAGATCTCATTCCTGCCTATCCTCTATCTTCCTGGGCTGTCAGACTCTACACTCGTCTCCCTGTCCTTTTGGGCTCAATTTCTCCATCTTCTCACGTAACTAGATTCTGCGGTGTGCCTGTTTGTGGGCTCTGTGCCAAGAATTTCTCTGATCGAACTGTTGGTTTTGTTGGTACAGGGAATGAAAAACCAGTAAGAAGAGTGGTAGTCAGTTTAACTGAATTACCGTGTTTGAACTTGGATAAGGAAATCTGGTATATAATGAGTACTCGGGCACTCAGGGGTACTGCTGTCAGAAGTTATCGGCGTAGGAAGACAGCTCTGGACTTTGACCTTAACCGGGCCCCGCCTGGTGAAAGTCAGGAGCTGGAGGGACCTTCAACTCAGCTAGGGCCTCGGGTAGTTCAAGCTAGTCTTCAACGGCAGGTTGTACAACCTGCAATGATTGATGTTGAGGCCATTGATGATGATGTTATTGAATCTACTCCCCGGGCTTTTGCTGAGGCTAAAAACAATTCAAGGAGAAACCGCAGCAGGGCTATAGTTGATGTGGATTTAGAAGATTGGACTAGGGTAACTAATAATAATCGCAACAAACGCAGAAGAGATTCTCGAAGCCAAACATTTGTTAACTGTGATCTTTATATAAACTTGGAAGGCAGTAGCGGCTCTATGAAAGATGACGTTAGGGAGTCTCCTGAACCTCCCAAAGAGCCTCTTTTCAAGTGCCCAATATGTATGGGTCCTTTGGTAGAAGAAATGTCGACAAGGTGTGGTCATATTTTTTGCAAGAGTTGCATTAAGGCTGCAATAAATGCACAGGGTAAATGCCCTACCTGTAGGAAAAATGTCACTGCGAAAGAGCTCATAAGGGTTTTTCTCCCATCAACTGGTTGA 915 0.4492 MLQTLNKDLIPAYPLSSWAVRLYTRLPVLLGSISPSSHVTRFCGVPVCGLCAKNFSDRTVGFVGTGNEKPVRRVVVSLTELPCLNLDKEIWYIMSTRALRGTAVRSYRRRKTALDFDLNRAPPGESQELEGPSTQLGPRVVQASLQRQVVQPAMIDVEAIDDDVIESTPRAFAEAKNNSRRNRSRAIVDVDLEDWTRVTNNNRNKRRRDSRSQTFVNCDLYINLEGSSGSMKDDVRESPEPPKEPLFKCPICMGPLVEEMSTRCGHIFCKSCIKAAINAQGKCPTCRKNVTAKELIRVFLPSTG 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0013 304 SMART ring_2 249 286 IPR001841 -
Lele55g0013 304 ProSitePatterns Zinc finger RING-type signature. 264 273 IPR017907 -
Lele55g0013 304 Pfam Zinc finger, C3HC4 type (RING finger) 248 286 - -
Lele55g0013 304 PANTHER ELFLESS, ISOFORM B 95 303 - -
Lele55g0013 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 225 302 IPR013083 -
Lele55g0013 304 ProSiteProfiles Zinc finger RING-type profile. 249 287 IPR001841 -
Lele55g0013 304 SUPERFAMILY RING/U-box 248 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0013 Lele-ChrLele55 112451 115248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0013 105 303 C3H Transcription Factor Family AT5G48655 50.746 3.30e-49 160