Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0012 ATGGTGGTGATCATGCAGCAGCAGAATCCCTCTGCACTGTTTCCACAGCTCAACAACAATCCTCAGTCCTCCTCTGCCACCACCTCCTCCTCCCTTAGGTCGCCGCCGTCTGCAACACCACCACCACAGTCCCAGTTATCTTCCTCACTCCCTCTTGTTGCTCCTCCCTCTGCTCCACCCCGTCAAACTCATCTGCCATCACTGCCACCCGATCATGTAATTGGACCAGTGGTACCCATCGCCGCCACGCACCCTTCCGGTGAGCCCGCTTTGACAGCGCCACCTGCCTGCCCGTTGCCAAGAGTCCGACTCTCGGATATTGCCCAATATGACGGAGCTCCAGCTGGGTCCTATGTCAGAGCAGTGGAAGCACTGTCAGGGTCTTTGATGAGTCATAATGCAGTCTTGATCGAATTGGGCAGCGAGGATACCGCTCTGATGAGGTGCGGCTTGGAAGGTTCGAGATTGTTCTTTCGGAGCAGGGCCCATCTGGGTGGGGGGAAGGGAAGCCGTGGGGTTCACATGTACAGGGCAGGAAGGGCTTTGGAAGATTGGGATTCATCTCCCCCATGTATGGCTGATATTTTTAGGTGCATGGGAAAGGCAGCTCGTTCTACATTGTGTGCCATTGCAAGGCATCTTCGTCTTCGAAGCGATGTTTTTAACCATTTGCTTGATGATACCCCATTGCCTGCTAATGAGGTGTCCTCATCAGTTCTTGTTGCAACCTACTCACTCACTTCTTTGCCAAATGGAAAAGGTGCTGTTGGAGGTGGTAAGCCAACCGTGAATGGTGAAATTGAGAAGGGTTTATTGACATTGATATCTTCAGACACTCCTGGTCTTCAGGTTTGTGACCCCAATGGCCGCTGGTATCTGGCAGATAGTGGGTCTGGTCCTGGGGATCTTTTGTTGCTCACAGGCAAGGCACTTAGGCAAGCCACCGCAGGTCTTCGTCCTGTGGCATCATATAGAGCTTCTACTGATTATTTTCTAGGTGCTAACAGTGGAGGAAGGACATCTTTTGCATTTAGACTCATGCCACAGGGCAACGCTATATTGGATTGTTCTCCAATTGCAGCAGCTGGACATGTTATTCCCCAAAGCTATGTTCCAATATCAGTAAGCCAGTTTATGGATGACCTTTCTGCTGAAGAAGTGATAGGCAGCCGATCTTATCATACTTATGTTGCTGGAAACAATGTGAACAAGGAACAGTCATTGAGAAGTGTTCTGTCAGATCCTTTGTCTGGTGCATTCCTTGAAGACGCCATGCTTGTCTCGTGTGGGCATTCTTTTGGTGGACTCATTCTAAGGAGAGTCATTGAAACTTCAAGATGTACTCTCTGCAATACAAATATTGAGACCAGTTCTCTGATCCCCAATTTTGCTCTAAGAGCAGCAGCCACAGCAGTCAAGCATGAGGACGATAGAAGGTTATTTCATAATGCTGTTCTCCGAAAGCGCAGGAAAGAAATGTGTGATCAAATGGATTCACTGAGAAGAACAAACAGGGATAATGGTGATGTTACTGGTGATGATGGACCCCACCGGGGAGTGCAGTATCCTTTTTCTGTAAATGAGAAGGTGATAATTAAGGGTAATAGGAGAACACCAGAAAAATTCGTTGGCAAAGAAGCTGTCATTACATCTCAGTGTCTTAATGGCTGGTACTTGCTTAAGATTATTGAAACTGGGGAGAATGTGCGCTTGCAATACCGTTCTCTTAGGAAGATATTGAACTCACCAGCGATGGAGGACCAGTCACAGCCGGTTCAAAATAGCAGCTCTTAA 1794 0.4833 MVVIMQQQNPSALFPQLNNNPQSSSATTSSSLRSPPSATPPPQSQLSSSLPLVAPPSAPPRQTHLPSLPPDHVIGPVVPIAATHPSGEPALTAPPACPLPRVRLSDIAQYDGAPAGSYVRAVEALSGSLMSHNAVLIELGSEDTALMRCGLEGSRLFFRSRAHLGGGKGSRGVHMYRAGRALEDWDSSPPCMADIFRCMGKAARSTLCAIARHLRLRSDVFNHLLDDTPLPANEVSSSVLVATYSLTSLPNGKGAVGGGKPTVNGEIEKGLLTLISSDTPGLQVCDPNGRWYLADSGSGPGDLLLLTGKALRQATAGLRPVASYRASTDYFLGANSGGRTSFAFRLMPQGNAILDCSPIAAAGHVIPQSYVPISVSQFMDDLSAEEVIGSRSYHTYVAGNNVNKEQSLRSVLSDPLSGAFLEDAMLVSCGHSFGGLILRRVIETSRCTLCNTNIETSSLIPNFALRAAATAVKHEDDRRLFHNAVLRKRRKEMCDQMDSLRRTNRDNGDVTGDDGPHRGVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIETGENVRLQYRSLRKILNSPAMEDQSQPVQNSSS 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0012 597 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 97 594 - -
Lele55g0012 597 SUPERFAMILY RING/U-box 408 474 - -
Lele55g0012 597 Coils Coil 483 503 - -
Lele55g0012 597 MobiDBLite consensus disorder prediction 1 94 - -
Lele55g0012 597 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 406 476 IPR013083 -
Lele55g0012 597 MobiDBLite consensus disorder prediction 1 34 - -
Lele55g0012 597 SUPERFAMILY Clavaminate synthase-like 184 358 - -
Lele55g0012 597 Gene3D - 171 388 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0012 Lele-ChrLele55 93620 101852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0012 408 586 Plant U-box Gene Family AT5G05230 40.884 2.32e-39 146