Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0004 ATGGGAAGCCTGTTCTCGCTCGTCCATGGATCAAAAACTAGTGGTGGGGGGAAGCCTCTTCATTGGACATCATGCCTCAAAATTGCTGAAGACCTAGCAACTGGACTTGTGTACATCCACCAGAACCCTGGCTTAATCCATGGGAACCTGAAATCTTCCAATGTGTTGTTAGGTTCGGACTTTGAGTCCTGTCTTACAGATTATGGCCTCCAAGTGTTGCTTAATCCAGATTCACTTGAAGAACCTAGCGCCACCACTTTATTTTACAGAGCACCGGAGTGCCGTAACATCCGGAGGCCGCCCACTCAACAAGCTGATGTATACAGCTTTGGGGTACTTCTGCTGGAGCTTTTAACCGGGAAAACACCCTTCCAAGACCTTGTTCTGGAACATGGTTCGGATATACCTAGGTGGGTTCGGTCCGTGCGGGAAGAAGAGACAGAGTCCGGGTCCGGGGATGACCCTGCCTCAGGGAATGACGCCTCAGAAGAGAAGCTTCAAGCTCTTTTGAACATTGCAATGGCGTGTTTTTCGCTAGTACCAGAAGACAGACCAACAATGAGAGAAGTTTTAAAGATGATAAGAGATGCAAGAGTCGAGGCCCAAGTGTCATCAAATAGTAGTGATCATTCTCCAGGCAGATGGTCAGATACTGTGCAAAGCTTGCCTCGGGAAGAGCATCTTAGCATTTGA 693 0.4834 MGSLFSLVHGSKTSGGGKPLHWTSCLKIAEDLATGLVYIHQNPGLIHGNLKSSNVLLGSDFESCLTDYGLQVLLNPDSLEEPSATTLFYRAPECRNIRRPPTQQADVYSFGVLLLELLTGKTPFQDLVLEHGSDIPRWVRSVREEETESGSGDDPASGNDASEEKLQALLNIAMACFSLVPEDRPTMREVLKMIRDARVEAQVSSNSSDHSPGRWSDTVQSLPREEHLSI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0004 230 MobiDBLite consensus disorder prediction 202 230 - -
Lele55g0004 230 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0004 230 SUPERFAMILY Protein kinase-like (PK-like) 2 194 IPR011009 -
Lele55g0004 230 Gene3D Transferase(Phosphotransferase) domain 1 1 218 - -
Lele55g0004 230 Pfam Protein kinase domain 24 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0004 230 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 2 200 - -
Lele55g0004 230 MobiDBLite consensus disorder prediction 140 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0004 Lele-ChrLele55 48510 51465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0004 2 230 Receptor kinase-like Gene Family AT1G60630 73.043 1.45e-111 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele55g0004 Pkinase 1.6e-21 CL0016