Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1443 ATGGTGGTGATCATGCAGCAGCAGCAGAATCCCTCTGCACTGGTGCCACAGCTCAACAACAATCCTCAGTCCTCCTCTGCCACCACCACCTCCGCCCTTAGGTCGCCGCCTTCTGCCACACCACCACCACAGTCCCAGTTATCTTCCTCACTCCCTTTTTTTGCTCCTCTCTCCGCTCCACTCCGTCAAACTCATCTGCCATCACTTCCACCCGATCATGTAATTGGGCCAGTGGTGCCCATCGCCGCCACACACCCTTCCGGCGAGCTCGCTTTGACCACGCCACCTGTCTTCCCGTTGCCAAGAGTCCGACTCTCGGATATTGCCCAATATGACGGAGCTCCAGCTGGGTCCTATGTCAGAGCAGTGGAAACACTGTCAGGGTCTTTGATGAGGCATAATGCAGCCTGGATCGAATTGGGCATCGAGGATACTGCTCTGATGAGGTGCGGATTAGAAGGTTCCAGATTGTTTTTTCGGAGCAGGGACCATCTGGATGGGGGGAAGGGTAGCCGTGGGGTTCACATGTACAGGGCCGGAGGGGCTTTGGAAGATTGGCATTCATCTCCCCCATGTATGGCTGATATTTTTAGGTGCATGGGAAAGGCAGCTCGTTCTACATTGTGCGCCATAGCAAGGCATCTTCGTCTTCGAAGCGATGTTTTTAACCATTTGCTTGATGATACCCCATTGCCTGCTAATGAGGTGTCCTCATCAATTCTTGTTGCAACCTACTCACACACTTCTTTGCCAAATGGAAAAGGTGCTATTGGAGGTGGTAAGCCAACCGTGAATGGTGAAATTGAGAAGGGTTTGTTGACATTGATATCTTCAGATGCTCCTGGTCTTCAGGTTTGTGACCCCAATGGCCGCTGGTATCTGGCAGATAGTGGGTCTGGTCCTGGGGATCTTTTGTTGCTCACAGGCAAGGCACTTAGCCAAGCTACTGCAGGTCTTCATCCTGCGGCATCATATAGAGCTTCTCCTGATTATTTTCTAGTTGCTAACAGTGGAGGAAGGACATCTTTTGCATTTAGACTCATGCCACAGGGCAACGCTATATTGGATTGTTCTCCAATTGCCGCAGCTGGACATGTTATTCCCCAAAGCTGTGTTCCAATATCAGTAAGCCAGTTTATGGATGACCTTTCTGCTGAAGAAGTGATAGGCAGCCGATCTTATCATACTTATGGTACTGGAAACAATGTGAATAAGGAACAGTCATTGAGAAGTGTTCTTTCAGATCCTTTGTCTGGCGCATTCCTTGAAGACGCCATGCTTATCTCGTGTGGGCATTCATTTGGTGGACTCATGCTAAGGAGAGTCATTGAAAATTCAAGATGTACTCTCTGCAATACAAATATTGAGACCAGTTCTCTGATCCCCAATTTTGCTCTAAGAGCAGCAGCCACAGCAGTCAAGCATGAGGATGATAGAAGGTTATTTCATAATGCTGTTCTCCGAAAGCGAAGGAAAGAAATGGGTGATCAAATGGATTCAGTGAGAAGAACAAACAGGGAAAATGGTGATGTTACTGGTGATGATGGACCACACCAGGGAGTGCAGTATCCTTTTTCTGTAAAGGAGAAGGTGATAATTAAGGGTAATAGGAGAACGCCAGAAAAATTCGTTGGCAAAGAAGCTGTCATTACATCTCAGTGTCTTAATGGCTGGTACTTGCTTAAGATTATTGGAACTGGGGAGAATGTGCGCTTGCAATACCGTTCTCTTAGGAAGCTATTGAACTCACCAGCGATGGAGGACCGGTCACAGCCAGTTCAAAATAGCAGCTCTTAA 1797 0.4802 MVVIMQQQQNPSALVPQLNNNPQSSSATTTSALRSPPSATPPPQSQLSSSLPFFAPLSAPLRQTHLPSLPPDHVIGPVVPIAATHPSGELALTTPPVFPLPRVRLSDIAQYDGAPAGSYVRAVETLSGSLMRHNAAWIELGIEDTALMRCGLEGSRLFFRSRDHLDGGKGSRGVHMYRAGGALEDWHSSPPCMADIFRCMGKAARSTLCAIARHLRLRSDVFNHLLDDTPLPANEVSSSILVATYSHTSLPNGKGAIGGGKPTVNGEIEKGLLTLISSDAPGLQVCDPNGRWYLADSGSGPGDLLLLTGKALSQATAGLHPAASYRASPDYFLVANSGGRTSFAFRLMPQGNAILDCSPIAAAGHVIPQSCVPISVSQFMDDLSAEEVIGSRSYHTYGTGNNVNKEQSLRSVLSDPLSGAFLEDAMLISCGHSFGGLMLRRVIENSRCTLCNTNIETSSLIPNFALRAAATAVKHEDDRRLFHNAVLRKRRKEMGDQMDSVRRTNRENGDVTGDDGPHQGVQYPFSVKEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKLLNSPAMEDRSQPVQNSSS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1443 598 MobiDBLite consensus disorder prediction 1 35 - -
Lele54g1443 598 SUPERFAMILY Clavaminate synthase-like 188 359 - -
Lele54g1443 598 Gene3D - 165 397 IPR027443 -
Lele54g1443 598 MobiDBLite consensus disorder prediction 1 49 - -
Lele54g1443 598 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 99 595 - -
Lele54g1443 598 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 407 477 IPR013083 -
Lele54g1443 598 SUPERFAMILY RING/U-box 409 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1443 Lele-ChrLele54 19057768 19067327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1443 409 587 Plant U-box Gene Family AT5G05230 40.331 7.56e-39 144