Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1435 ATGAAAATTGAGAAGCACGAGCCGAGGTCCGGGGACAGATACGAGTTCCGGAGGTGTCCATTGTCCAATGTTCCTGTTGCAATTTACTCCCCAACGCATTGGAAGAGTAGGAGAAAAATTGCAATTTCAATGTACTTTAGGAGAATACAATGTCGAGATTGGAGGTGGGGCGTTTCGTTTCAGCCATCCAAATACTTTATTAGGCCAAGATGCTATGGTGATGCATGCTTTCAATCTCAGTGCCCTAAGACAACCGTGGAAGAATGTGTTTCGCATGATAGCATAATAAGGAGACGCCTATTGGAATCTTTTTTATATAGGGTCGCATCATCTAATAATAGTTGTACTGATCTGAACAGAAGGCCTAGTTTATATTTGAGAAGTACTCAGTTACGCTTCTACAGTTCAGAAAGTGATGGAAGGAATGCAAGTGAGGATAAACATGTAAATGCAAATGATGGAGCTCACTGTGATAAGGGAAAAAGGTGGCAAGATAAGTTTGGGGAAGATGCCAAACTCTGTAATGCTCATGCTCGACTTGGGGAACAGGATCAAGAGGAGTGGCTCAAGAATGAGAAGATTTCCATTGAAAATAAAAAAAGAGAATCACCCTTTTTAACCAGAAAGGATAAGTTCAAAAATGAGTTTCTGAGGAGGGTTGTTCCTTGGGAGAAAATAAACATTTCATGGGACACATTTCCTTACTATATTCATGAGAATACCAAAAATCTTCTGGTGGAATGTGCTGCTTCCCATTTGAGACATAATAAGGTTGCTTCTTCTTATGGTGCTGGCCTCTCATCTTCAGGTGGGAGAATATTGCTTCAGAGCGTTCCTGGTACTGAGCTCTATCGAGAAAGATTAGTTAGAGCACTTGCACAAGATCTAAAAGTTCCTTTGCTGGTGCTTGATAGCAATATCCTTGCTCCTTATTATATTGATGATGACTTATCATCATCAGAATGCGAGTCTGATGATGAGAATCCAGAATCTGGGGAGGAGGCTTCTATGGAGTCAGAGGATGATGATAACAATGCAAGCAATGAAGAAGAGTGGACTAGCAGTACTGAGGCAAAGTCAGATGCTAGTGATAACGAAGAACATGATGCGATAGCAACTGCTGAAGCAGCCCTAAAGAAGGTGAAAGCTGCTGTTCAGAAACTTGTTCCCTACAACATTGAAGACTTTGAAAAGAGGTCATCTGAAGATTCAGAAAATTCTGAGTCAACCAAATCTGAGGTTGTGAAGCCTTCTGACCAATCTGGATGCCAATTAAAGAAAGGTGACCGTGTGAAATACATTGGGCCATCTGTTCAAATGAAAGCCAACAATAGGATCATACTGGGGAAGATACTGACATCTGATGGTCCAACTAATGCCTACACTAATATCCATGGCAGATCTTTGTCCAATGGTCAACGTGGAGAGGTATATGAGGTGGAAGGGGATCAAGTTGCTGTCATCATGGACATTACCGAAGATAATACAAAGGAGGGTGAGGTGGAGAAATCTAATGAACATACAGAATCACGACTTTGTTGGATACATGTTAATGACATTGAGCATGACCCTGATGCTCAAGTACAGGATTGCTACATAGCTATGGAAGCTCTATGCGAGGTTTTGGATTCCAAACAACCTCTTATTGTCTATTTTCCAGACAGTACACAGTGGTTTCATAAATCAGTCGTGAAGTCAAACAGAAGAGAGTTCTTTCTCAAGGTTCAAGAAATGTTTGACAAGTTGTCTGGTCCTGTTGTGTTGATTTGTGGACAAAACAAAATTCTATCAGGGTCAAAAGAGAAAAAGCAATTTACAATGATACTTCCAAACTTCGGACGCGTTGGTAAGCTGCCTCTTTCTCTGAAACACTTGACTGAGGGACTTGGAGCAACAAAGAGATCGGATGATGATGAAATCCAGAAGCTTTTCACTAATGTTTTGTGCATACATCCACCTAAGGAGGAGGATCAACTTGGAACTTTTAAAAAACAACTTGAGGAAGACAGGAAAATTGTGATTTCACGTAGTAGTTTGAATGAACTGCATAAGGTTCTTGAAGAACATGAGCTATCATGCTTGGACCTCTTGCGAGTAAATACTGACAATGTCATTCTGACAAAGCCAAAAGCTGAAAAGGTGGTGGGCTGGGCAAAAAACAATTACTTGGCATCTTGCCCACTTCCTTATGTTAAAGGAGAACGATTGTGCCTGCCTCGTGAAAGTCTTGAAATTGCAATCTCAAGATTGAGGGATCAAGAAACTATGTCACGGAAGCCCTCTCAGGGTCTGAAGAACCTCGCAAAGGATGAGTATGAGAGCAACTTCATTTCAGCTGTAGTACCTCCTGGTGAAATTGGGGTGAAGTTTGATGACGTAGGTGCTCTTGAAGATGTGAAGAAGGCACTTAATGAACTTGTCATCCTTCCAATGAGAAGGCCAGAGCTTTTCTCTCGTGGAAACTTGTTACGGCCTTGCAAAGGAATATTACTTTTTGGTCCTCCTGGCACTGGGAAAACTCTTCTGGCCAAGGCACTTGCAACAGAAGCAGGCGCAAATTTTATCAGCATAACGGGCTCAACTCTAACATCAAAGTGGTTTGGAGATGCTGAGAAACTCACCAAAGCCCTGTTCTCCTTTGCTAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGATAGTTTGCTTGGTGCTCGAGGGGGTGCTTTTGAGCATGAAGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGACAAAAGAGAGTCAAAGAATCCTCATTCTTGGTGCAACAAACAGGCCTTTTGATCTTGATGATGCTGTTATACGCCGCCTACCAAGAAGGATATATGTGGATTTGCCAGATGTTGAGAATCGGATGAAGATTTTAAGAATCTTTCTTGCACAAGAAAATCTCGATCTTGATTTTCAGTGTGACAAACTTGCTAACTTGACTGAGGGATACTCTGGCAGTGATTTGAAGAACCTCTGCATTGCTGCGGCATATAGGCCTGTTCAAGAGCTACTAGAGAATGAAAAGAAGGCAAGCTACAGAGATCCAACACCGGCATTAAGACCTCTAAAATTGGATGATTTTATTCAGGCAAAATCTAAGGTTGGGCCATCAGTCGCCTATGATGCAGCGAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTACGGAGAAGGTGGAAATAGGACAAAATCTCCATTCGGATTTGGAAGCTGA 3249 0.4186 MKIEKHEPRSGDRYEFRRCPLSNVPVAIYSPTHWKSRRKIAISMYFRRIQCRDWRWGVSFQPSKYFIRPRCYGDACFQSQCPKTTVEECVSHDSIIRRRLLESFLYRVASSNNSCTDLNRRPSLYLRSTQLRFYSSESDGRNASEDKHVNANDGAHCDKGKRWQDKFGEDAKLCNAHARLGEQDQEEWLKNEKISIENKKRESPFLTRKDKFKNEFLRRVVPWEKINISWDTFPYYIHENTKNLLVECAASHLRHNKVASSYGAGLSSSGGRILLQSVPGTELYRERLVRALAQDLKVPLLVLDSNILAPYYIDDDLSSSECESDDENPESGEEASMESEDDDNNASNEEEWTSSTEAKSDASDNEEHDAIATAEAALKKVKAAVQKLVPYNIEDFEKRSSEDSENSESTKSEVVKPSDQSGCQLKKGDRVKYIGPSVQMKANNRIILGKILTSDGPTNAYTNIHGRSLSNGQRGEVYEVEGDQVAVIMDITEDNTKEGEVEKSNEHTESRLCWIHVNDIEHDPDAQVQDCYIAMEALCEVLDSKQPLIVYFPDSTQWFHKSVVKSNRREFFLKVQEMFDKLSGPVVLICGQNKILSGSKEKKQFTMILPNFGRVGKLPLSLKHLTEGLGATKRSDDDEIQKLFTNVLCIHPPKEEDQLGTFKKQLEEDRKIVISRSSLNELHKVLEEHELSCLDLLRVNTDNVILTKPKAEKVVGWAKNNYLASCPLPYVKGERLCLPRESLEIAISRLRDQETMSRKPSQGLKNLAKDEYESNFISAVVPPGEIGVKFDDVGALEDVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRTKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDVENRMKILRIFLAQENLDLDFQCDKLANLTEGYSGSDLKNLCIAAAYRPVQELLENEKKASYRDPTPALRPLKLDDFIQAKSKVGPSVAYDAASMNELRKWNEMYGEGGNRTKSPFGFGS 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1435 1082 Pfam AAA+ lid domain 986 1017 IPR041569 -
Lele54g1435 1082 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 787 963 - -
Lele54g1435 1082 MobiDBLite consensus disorder prediction 398 412 - -
Lele54g1435 1082 Gene3D - 788 1064 IPR027417 -
Lele54g1435 1082 CDD AAA 827 960 - -
Lele54g1435 1082 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 211 1075 - -
Lele54g1435 1082 ProSitePatterns AAA-protein family signature. 932 951 IPR003960 GO:0005524|GO:0016887
Lele54g1435 1082 Gene3D - 961 1046 - -
Lele54g1435 1082 MobiDBLite consensus disorder prediction 318 348 - -
Lele54g1435 1082 Pfam ATPase family associated with various cellular activities (AAA) 829 959 IPR003959 GO:0005524|GO:0016887
Lele54g1435 1082 SMART AAA_5 825 962 IPR003593 -
Lele54g1435 1082 MobiDBLite consensus disorder prediction 398 428 - -
Lele54g1435 1082 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 788 1049 IPR027417 -
Lele54g1435 1082 MobiDBLite consensus disorder prediction 318 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1435 Lele-ChrLele54 18984500 18997019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1435 823 1023 Calmodulin-binding Proteins AT3G56690 35.922 1.98e-31 131