LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele54g1399	ATGAGGATATTCGATAGCGCGAAAAGATTATTCGTACCTTGGTGTTGGAATCCCTCCAAGAAATGGGGCTGTCAACGTCGTTTTGACAGCCCGATTGAAACTCCTGAGGCACTGTCGACCACCAAGAAGTTTCGTTTATGCTTTAAAGGGTTAGATTATCAGATGTGGCCTTACGTTCCCTGCGATCGCACAAACCCTATCAATCACCCGCCCGTTCCCTTCGCGGCTCCTACTGTCGTCTTCCTCACTACTGCTATTGCCCACCAACAGAGGTCGCCGCTTCTTGATCGCGCGCTGGAGAATCTGTGGTTAGCCATAATCTTTTCGTTCCCAGCAATGGTTGGAAGGCTTGAAATCGGAGCTGTACCCTTCAATCCAGATGGATGGGGTCCGCCTGACGCCGCCGCGTCCTCCACCAGCAACCTCCCGGTGAATGTACCTTACGCCCCCTTTTCTCGTTCAGACAAACTGGGTCGAATCGCTGATTGGACCCGCAACTTCAACAACCCAAACCGAACCAAGAACCCGGCTGATGCGGTATTTGACTTCACTATCGACGATTCCTTCCCGGCCTCCGCCGACGATGATTCCTCCTTCCGCCTCGTCGACGGAAAACCCCCTCCGCGACCCAAGTTTGGTCCCAAATGGCGGTTCCAGCAGCAACGGCAGCTCCCTCAACGACGTGACGAGGAGGTGGAGGCCCGAAAACGTGAGGCTGAGAAGGAGAGGGCCCGCCGCGACCGTCTCTATCATCTCAATAGATCCAACGCGAATAACACTCGTCGTGAAGCCGCGGTCCTCAAATCCTCTGTGGATATTCAGCCCGAGTGGAACATGCTGGACCAGATACCATTTTCAACTTTTTCAAAGCTGTCATTCGCTGTTCCTGAACCCGAAGACCTTCTTCTCTGTGGTGAGCTTGAGTATTATGACAGGTCATACGATAGAATTACCCCCAAGAACGAACGTCGTCTTGAGAGGTTTAAGAATAGGAACTTTTTCAAAGTTACTACCACTGATGACCCAGTGATCCGAAGGCTCGCGAACGAGGACAAAGCGACAGTTTTCGCCACTGATACTATTCTTTCAACGCTCATGTGTGCATCCAGGTCGGTTTACTCATGGGATATTGTTGTTCAGCGAGTTGGGAACAAGTTGTTTTTTGATAAGAGGGATGGGTCGCAGTTGGATTTGCTGTCCGTCCACGAGACCTCGCAGGAGCCATTGCCTGAGGCTAAGGATGATATTAACTCAGCTCATTCATTGAGTGTCGAGGCAGCGTATATTAATCAGAATTTCTCGCAACAAGTTCTAATTAGAGATGGGAATAAGGTGACTTTTGATGAGCCTAATCCTTTTGCAAATGAGGGTGAGGAGGTTGCTTCTGTGGCATATAGGTATAGGAGGTGGAAGCTTGATGATGATATGTATCTTGTTGCGAGGTGTGAAGTTCAGAGTGTAGTTGATATGAACAATCAGAGGTCCTTCCTTACTTTGAATGCACTGAATGAATTTGATCCCAAATATTCTGGTGTTGATTGGAGACAGAAGTTGGAGACACAAAGGGGTGCAGTCTTGGCTACAGAGCTGAAGAATAACGCAAATAAGTTGGCCAAATGGACGGCCCAAGCTCTGTTGGCAAGTGCAGATATGATGAAGTTGGGTTACGTTTCTAGGGTTCATCCTCGTGATCATTTTAATCATGTGATTTTGGCTGTAAATGGTTATAAACCCAGAGATTTTGCAACTCAAATTAATTTGAACACATCGAATATGTGGGGTATTGTGAAGTCTATTGTGGACTTGTGCATGAAATTGAATGAGGGAAAGTATGTTTTAGTGAAGGATCCATCTAAGCCCCAGGTTAGGATCTATGAGGTTCCAGCTGATGCATTTGAGAACGACTATGTGGAGGAGCCACTGCCCGAGGAGGAACAAGTTCAACCTCCAACGGAGGGTGGTGATGCTGGGGAGGCAACTGTTACTACTAATGATGTGGAAGATAAGCAGATTGATGGTCAAGCCGAAACGGTAATTATGTGA	2043	0.4807	MRIFDSAKRLFVPWCWNPSKKWGCQRRFDSPIETPEALSTTKKFRLCFKGLDYQMWPYVPCDRTNPINHPPVPFAAPTVVFLTTAIAHQQRSPLLDRALENLWLAIIFSFPAMVGRLEIGAVPFNPDGWGPPDAAASSTSNLPVNVPYAPFSRSDKLGRIADWTRNFNNPNRTKNPADAVFDFTIDDSFPASADDDSSFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEARKREAEKERARRDRLYHLNRSNANNTRREAAVLKSSVDIQPEWNMLDQIPFSTFSKLSFAVPEPEDLLLCGELEYYDRSYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCASRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVVDMNNQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVNGYKPRDFATQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEEEQVQPPTEGGDAGEATVTTNDVEDKQIDGQAETVIM	680

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele54g1399	680	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7	117	649	IPR007783	GO:0003743\|GO:0005737\|GO:0005852
	Lele54g1399	680	MobiDBLite	consensus disorder prediction	194	244	-	-
	Lele54g1399	680	Hamap	Eukaryotic translation initiation factor 3 subunit D [EIF3D].	115	638	IPR007783	GO:0003743\|GO:0005737\|GO:0005852
	Lele54g1399	680	Coils	Coil	227	247	-	-
	Lele54g1399	680	MobiDBLite	consensus disorder prediction	222	244	-	-
	Lele54g1399	680	MobiDBLite	consensus disorder prediction	639	680	-	-
	Lele54g1399	680	Pfam	Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)	121	626	IPR007783	GO:0003743\|GO:0005737\|GO:0005852

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele54g1399	Lele-ChrLele54	18779346	18786455	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele54g1399	117	672	Eukaryotic Initiation Factors Gene Family	AT4G20980	78.007	0.0	915