Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1394 ATGGCGCCGAAACGTGTTTCTCCTTTGGATGAACCACCCTCAGCTTCTTCTTCATCGGAAGAAGAGGATGCTTCATCCGAAGTAGGTTCTTCATCTGAAGAGGAGGACGATCAACCTGCAAAACCCCCGCAACCCCTCTCTACTGAGAAGAAGCCCGCTGCCAAAAAGCCTGCACCTGCTGCTCCGGTCGCAAAATCTCAACCTAAAGCTGCAGTGTCGCAATCTGAGACAGAATCTGATGCCGGATCTGACTCCGACGATGAGCGCCCCACTGAGAATACGGATTTGATTGTCAAGCCCATTGCGTCCAAGCCTAAAGAAGATACGCCTAAAGCAAAGAAGTCCAAGTCTCAGCCATCCATTACGCCGTCCAAAGCAGCGAACAAGCGACCGAGTGACAACAATCGGCCGGTCAGTGACTCGAAGAAGGCAAAGAAGGGGAAGGACGCTGTAGGAAAAGATGAGATCCCGGCGGCAGAGGATGATGGTAAAAAAGCTGGTGATGAGTCCAAGAAGCTTTTTCAGAGACTATGGAGTGAGGAAGATGAGATTGCGATCCTCACTGGTTTAGCCGAATTTGCAGCGAAGACTGGAGAAGCCCCGCTTAAGGATATTAATGGATTTCACGACTTCATAAAGAAGTCGGTCCATGTGGATGTCTCCAATGAACAATTGGCGAATAAGATTCGGACTTTGAAGAGGAAGTACGTGAAGAATGCTCAAAGAGGGAAAAATGGCGAAGGCCCTAGTTTTTCAAAACCATACGATAAGAAAGTCTTTGAATTGTCAAAGAAGATATGGGCTAATGAAGGAGTCAATGGAGGAATAGACATTACAAAGTCGAACGGGAAAGTGAAGAAAAGTATGAAGGAGGGTAGCAGTGTTGCGGTTTCTCAGAAACCAGACACTGATTTGGTTTCATATTCGAAGGAAGCTAGAAAGATTGATATTGATCCGAATGCAGGTTCGCTGCTGAGTTTAAGTGAAATGATTAGGTTCAACAAAAGTCTGGGTCTGTCAGGGTTGGATGATGATGCTATTAAGAGGGGATATGAATTGATTGGAGCATCCAAGAAGGCAGAGTTGGAGGACAGGTGGAAGAAACTGCAGATTGCAGAGTTGGAGCTGTTTGTGAAACGAGTTGAGCTTGTCAAGGATGAGGCTAATTTGATATGGGAGGCAACCAAATCTTCAGGCAATTAG 1203 0.4638 MAPKRVSPLDEPPSASSSSEEEDASSEVGSSSEEEDDQPAKPPQPLSTEKKPAAKKPAPAAPVAKSQPKAAVSQSETESDAGSDSDDERPTENTDLIVKPIASKPKEDTPKAKKSKSQPSITPSKAANKRPSDNNRPVSDSKKAKKGKDAVGKDEIPAAEDDGKKAGDESKKLFQRLWSEEDEIAILTGLAEFAAKTGEAPLKDINGFHDFIKKSVHVDVSNEQLANKIRTLKRKYVKNAQRGKNGEGPSFSKPYDKKVFELSKKIWANEGVNGGIDITKSNGKVKKSMKEGSSVAVSQKPDTDLVSYSKEARKIDIDPNAGSLLSLSEMIRFNKSLGLSGLDDDAIKRGYELIGASKKAELEDRWKKLQIAELELFVKRVELVKDEANLIWEATKSSGN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1394 400 MobiDBLite consensus disorder prediction 115 134 - -
Lele54g1394 400 Pfam Protein of unknown function, DUF573 174 267 IPR007592 GO:0006355
Lele54g1394 400 MobiDBLite consensus disorder prediction 1 169 - -
Lele54g1394 400 MobiDBLite consensus disorder prediction 135 169 - -
Lele54g1394 400 MobiDBLite consensus disorder prediction 11 25 - -
Lele54g1394 400 Coils Coil 222 242 - -
Lele54g1394 400 PANTHER BNAANNG10740D PROTEIN-RELATED 11 392 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1394 Lele-ChrLele54 18760903 18762105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1394 4 397 GeBP Transcription Factor Family AT1G61730 31.051 5.45e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lele54g1394 DUF573 2.5e-33 CL0123