Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1371 ATGTCTAGTATGACAGAACGAGACACCAAGCCGTTTATGCCAGGCCGTGATCCTACCATGTTAGTTGGTCCAAATGGAAGCTTCAACTCCCGGGATTGTGTTGTTTCAGAAGGCTCAATTCCAATTAACTACGTTAGAGACAGTTGGATCAACCAGAGAGACAGGTTTCTGAATATGTTGCCCACAAATACTAATTATGCAGTTCTGCCAGAAACATCAGGAGCGCCTTCGTTGCAAATCATACAGCCACCTGAAACATCAAGAGATGATAGGGTGAATCAAGTTGAAGACCCTCCTGTTAAAAAAGAAGTTGTCCAATTGAAGAAAAGGCAGAGTGGGGGTGCTCCAAAGACTCCAAAAGCGAAAAAACCAAGGAAGCCAAAGGATAATAGCAATGCTTTGGTTCAATGTGAGAAGCCGGCAAGGAAAGCTATGGAGGTTGTGATAAATGGAATTGATATGGACATTTCTGGTCTACCCATTCCTGTTTGCTCGTGTACTGGGGCTTCTCAGCAGTGTTATCGATGGGGCTGTGGTGGTTGGCAATCAGCTTGTTGTACCACAAATGTGTCAATGTATCCGTTGCCAATGAGCACTAAAAGGCGTGGCGCAAGGATAGCTGGACGGAAAATGAGTCAAGGCGCTTTTAAGAAGGTTTTGGAAAAACTTGCAGCCGAAGGATATAATTTTGCTAATCCTATTGATCTTAGGACTCACTGGGCTAGGCATGGCACCAACAAGTTTGTCACTATCAGGGTCAGTTCTCTCATATCATCTTTTAAGTCTTTATGTGGCAAAAGGAAGTTCTAG 810 0.4395 MSSMTERDTKPFMPGRDPTMLVGPNGSFNSRDCVVSEGSIPINYVRDSWINQRDRFLNMLPTNTNYAVLPETSGAPSLQIIQPPETSRDDRVNQVEDPPVKKEVVQLKKRQSGGAPKTPKAKKPRKPKDNSNALVQCEKPARKAMEVVINGIDMDISGLPIPVCSCTGASQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRTHWARHGTNKFVTIRVSSLISSFKSLCGKRKF 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1371 269 MobiDBLite consensus disorder prediction 1 24 - -
Lele54g1371 269 MobiDBLite consensus disorder prediction 89 108 - -
Lele54g1371 269 PANTHER - 1 252 IPR010409 -
Lele54g1371 269 MobiDBLite consensus disorder prediction 68 88 - -
Lele54g1371 269 SMART GAGA_bind_2 1 252 IPR010409 -
Lele54g1371 269 MobiDBLite consensus disorder prediction 68 133 - -
Lele54g1371 269 Pfam GAGA binding protein-like family 1 252 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1371 Lele-ChrLele54 18639811 18641039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1371 1 252 BBR or BPC Transcription factor family AT2G01930 56.767 1.73e-96 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lele54g1371 GAGA_bind 5.1e-101 No_clan