Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1331 ATGGAAGCTGCCATTAATGGTGGAAATGGAGAGCTGGTGGACGACAGAACTGATGCAGCTCATGACAAAGCAACTGATGATGATGAGCAACTTCGTCTCAAGAACATGATCGCAAGCCATCCTTTGTATGGCATTTTGATCCAATCTCACTTCAACTGTTTGAAGGTGGGATTAGGTGAAGTTGCAGAATTTGATATAGCAAAAGATGCAGTGAAGCAGTTAGTGAAGTCCAAGCCCAGATCCCACCACACTATTAGTCCCACTTCTTCAGAGCTCGATCACTTCATGGAAGCATATTGCATGGCGCTTTGTAAGCTGAAGGAAGCCATAGAGGAACCAACAAGAGAAACAAATGCTTTCATAAATGGAATGTATATAGATCTCAAGGACCTCACTGACAACGATAATATGCAACCAAATAATCCCCAAGAATCCTTATGA 441 0.424 MEAAINGGNGELVDDRTDAAHDKATDDDEQLRLKNMIASHPLYGILIQSHFNCLKVGLGEVAEFDIAKDAVKQLVKSKPRSHHTISPTSSELDHFMEAYCMALCKLKEAIEEPTRETNAFINGMYIDLKDLTDNDNMQPNNPQESL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1331 146 Pfam KNOX2 domain 90 132 IPR005541 GO:0003677|GO:0005634
Lele54g1331 146 SMART KNOX2_2 81 133 IPR005541 GO:0003677|GO:0005634
Lele54g1331 146 Pfam KNOX1 domain 33 57 IPR005540 GO:0003677|GO:0005634
Lele54g1331 146 SMART KNOX1_2 31 74 IPR005540 GO:0003677|GO:0005634
Lele54g1331 146 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 17 136 - -
Lele54g1331 146 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1331 Lele-ChrLele54 18377973 18378795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1331 33 142 Homeobox Transcription Factor Family AT4G08150 33.036 2.81e-10 55.5