Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1330 ATGCTTGGCCTTAGCTATGAATCAAAGCGGGGTTACATCGGGCTCGAGTATTATGGTAGGACTGTTAGCATCAAAATTCTTCCTGTTGGTATCCACATGGGTCAGCTTCAACAAGTGTTGAGCCTTACTAAGACGGAAGAGAAAGTTGCTGAGCTCATTAAGCAATTTTCGGGTCGAGGAAGGACATTGATGCTCGGAGTTGATGACATGGATATCTTTAAGGGAATAAGTTTGAAGCTTTTGGCAATGGAACAGCTTCTTATTCTACATCCAGAGTTTGAAGGGAAGGTTGTATTGGTCCAAATCGCTAATCCGGCCCGGGGGAAAGGGAAAGACGTGAAGGAAGTGCAAGCTGAGACAAAGGCAACGGTTAAAAGGATTAATGAAACATTTGGGAAACCTGGGTATGATCCTGTCATTCTGATTGAGGAGCCACTCAAGTTCTATGAGAAAGTTGCATACTATACTGTTGCCGAGTGTTGTCTAGTCACTGCAGTTAGGGACGGAATGAATCTCATACCGTATGAATACATAATCAGTCGTCAAGGAAACGAAAAATTGGACAAAGTTTTGGGACTATCTTCCTCTCCTAAGAAGAAGAGCATGTTGGTTGTCTCTGAGTTCATAGGTTGTTCGCCATCTTTGAGTGGAGCAATCAGAGTGAACCCATGGAATATTGATGCAGTAGCAGATGCAATGGACTCTGCCCTGGAAATGGCTGATTCAGAGAAACAGCTTAGGCATGAGAAGCATTATAGATATGTTAGTACCCATGATGTCGGGTACTGGGCTCGAAGCTTCTTGCAGGATTTGGAAAGGACTTGTAGTGATCATGTCCGGCGAAGGTGGTGGGGAATCGGGTTTGGATTGGGTTTTAGAGTTGTAGCACTTGATCCAAACTTCAGGAAGCTCTCAATGGAGCACATAGTTTTGGCCTACAAGCGAACAAAAACTCGGGCGATCCTTCTAGATTATGATGGCACACTAATGCCTCAAGCCTCCATCGATAAGAGTCCCATAAGTAAAACTATTGAAATTCTTAGTAGCTTGTCTAGAGACAAGAACAACATGGTGTTTCTTGTTAGTGCTAGAAGCCGAAAAACACTTGCTGAATGGTTTTCTCCTTGTGAGAACCTGGGAATTGCAGCTGAGCATGGGTACTTTCTAAGACTGAAGCGTGACGCAGAATGGGAAACATGTGGACCTGCAACAGACTGTAGCTGGAAACAGATTGCTGCGCCTGTGATGAAGCTTTATACTGAAACAACTGATGGATCCACTATCGAAGATAAAGAGACTACACTTGTGTGGTGCTATGAGGATGCAGATCCAGATTTCGGGTCATGCCAAGCTAAGGAACTTCTTGATCATCTTGAAAGTGTGCTTGCAAATGAACCTGTAACTGTCAAGAGTGGCCAGAACATTGTAGAGGTTAAACCACAGGGGGTAAGCAAAGGGATCGTGGTCAAGCGGCTGCTTTCAACCATGCAAGAAAATGAAATATCACCTGATTTTGTGTTGTGCATAGGAGATGATAGGTCTGATGAAGATATGTTTGAGGTAATCTCCAATTCCATGGCTGGTCCCACCCTTGCGCCAAGGGCCGAGGTATTTGCGTGCACGGTTGGCCGGAAGCCGAGCAAAGCCAAGTATTATCTGGATGATACAGCTGAAATAGTGAGATTGATGCAGGGACTGGCCCGCGTTTCAGAACAAACAGTTCTAGTTTAG 1731 0.4466 MLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQQVLSLTKTEEKVAELIKQFSGRGRTLMLGVDDMDIFKGISLKLLAMEQLLILHPEFEGKVVLVQIANPARGKGKDVKEVQAETKATVKRINETFGKPGYDPVILIEEPLKFYEKVAYYTVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGLSSSPKKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLGFRVVALDPNFRKLSMEHIVLAYKRTKTRAILLDYDGTLMPQASIDKSPISKTIEILSSLSRDKNNMVFLVSARSRKTLAEWFSPCENLGIAAEHGYFLRLKRDAEWETCGPATDCSWKQIAAPVMKLYTETTDGSTIEDKETTLVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGIVVKRLLSTMQENEISPDFVLCIGDDRSDEDMFEVISNSMAGPTLAPRAEVFACTVGRKPSKAKYYLDDTAEIVRLMQGLARVSEQTVLV 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1330 576 Gene3D - 318 446 IPR023214 -
Lele54g1330 576 Gene3D - 447 575 IPR023214 -
Lele54g1330 576 TIGRFAM T6PP: trehalose-phosphatase 317 567 IPR003337 GO:0003824|GO:0005992
Lele54g1330 576 FunFam Alpha,alpha-trehalose-phosphate synthase 39 256 - -
Lele54g1330 576 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 567 IPR001830 GO:0003824|GO:0005992
Lele54g1330 576 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 318 435 - -
Lele54g1330 576 Pfam Trehalose-phosphatase 322 556 IPR003337 GO:0003824|GO:0005992
Lele54g1330 576 CDD HAD_TPP 320 561 - -
Lele54g1330 576 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 448 575 - -
Lele54g1330 576 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 321 522 IPR006379 -
Lele54g1330 576 SUPERFAMILY HAD-like 319 567 IPR036412 -
Lele54g1330 576 Gene3D Glycogen Phosphorylase B; 34 256 - -
Lele54g1330 576 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 275 - -
Lele54g1330 576 Pfam Glycosyltransferase family 20 1 272 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1330 Lele-ChrLele54 18354995 18357499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1330 1 576 Trehalose Biosynthesis Gene Families AT1G68020 80.936 0.0 984