Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1312 ATGGGAATAAGCTTAAGTCCATTCAAGCAGAACCAAGTCTCATCAAGCTTGAATGAGAATGATATAGCTCCTGTTTTATTCTTGTCGTACTTCAAAACCGTGGGTAGAAGCAATTTTCCCACCAAAAGAAGTCCAAAATCCATGGCTATCAAAAAACGAAAGGAGAAACCATTAACTTGTGATGAGAAGAACAGAGCTTTACAGAGAGTCAACATTTTCACGCCCAAAAATCCCTATTTCAAAATTGTCATGCAGCCAGCATACATCAGGAGCGATTTGTCGGTACCAGCAAGTTTTGTGAAACAGTATTTGAAGCAGAAGGAGGAAGGAGATGCCCTTCTCCGGGTTTCAGATGGTAGAACATGGCGTGTAAAGTGCAATAGGCAAGAAGGAAATCAGCACAGTTTGTTTCCCTTTTGTGATTTTGTGAAAGAGGTAAAGAATCTCGATGATGCTTATGAATTTTGTAGGAATGAAACTGAGGACGTAGACCATATTCTTAGGCTCAATCCATTTGGGGGCTTTTTCTTCTGA 534 0.4026 MGISLSPFKQNQVSSSLNENDIAPVLFLSYFKTVGRSNFPTKRSPKSMAIKKRKEKPLTCDEKNRALQRVNIFTPKNPYFKIVMQPAYIRSDLSVPASFVKQYLKQKEEGDALLRVSDGRTWRVKCNRQEGNQHSLFPFCDFVKEVKNLDDAYEFCRNETEDVDHILRLNPFGGFFF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1312 177 Gene3D - 58 164 IPR015300 -
Lele54g1312 177 CDD B3_DNA 78 137 IPR003340 GO:0003677
Lele54g1312 177 SUPERFAMILY DNA-binding pseudobarrel domain 73 136 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1312 Lele-ChrLele54 18241993 18243403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1312 54 131 REM Transcription Factor Family AT1G49480 27.160 2.92e-07 47.0