Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1306 ATGTCAATGTTCTCTTCTCTCGTTCTCCTTCTTCTTCCTCTTCTTCTACTCACTTCCTTCACTACCCCATCATCTTCCTCCTCCAGCGAGGCTTTCATCTTTGGCGGTTGCTCTCAGGCTAAGTTTACGCCGGGCTCTGCCTACGAGTCCGGCGTCAACTCCGCACTCACTACCATCGTCAACGCCGCCATGTTCTTGTCCTACAACAACCTCACCGTCCCTCCCTCCTCCTCCTCACAGGACACCCCTATCTATGGCCTCTTCCAGTGCCGTGGCGACCTTGCCGCCACCGACTGCTCCCGCTGTGTTGCGCGGGCCGTCTCCCAGCTTGGCACCATCTGCCCTGACTCCACCGGCGGGGCCTTGCAGCTCGACGGTTGTTTCGTTAAGTATGATGATTCTAAGTTCTTGGGCGTGGAGGACAAAACTTTGGTCCTGAAGAAATGTGGACCGTCCATTGGGTTTACTTCCGACGTGTTGACTCGGCGAGATGCCGTGCTGGCGTATTTGGAGACGTCCGATGGGATATACAAGACCTTTAGAACGACCGGCTCGGGGGATTTACAGGGTATGGCGCAGTGCGTAGGGGATTTGAGTGCGACCGAGTGCCAGGATTGTCTCTCGAATGCGATCGGACGGATCAGAGTAGAGTGTGGGCCCGCACAGTGGGGACAGGTATACTTGGCCAAGTGCTACGCGCGCTACTCCCAAGGTGGAGATTACTCGCCCGGCGGAAACGGTGAGCATAAAAACAACAAGAACGACGATGAACTTCAGAAGACACTGGCAATAATAGTTGGACTCATAGCAGGGGTGGCTCTACTCATCATATTCATTTCATTCTTGACCAAGTTGTGTAAAAAGGATAAAGGTGGCAAATGA 882 0.5385 MSMFSSLVLLLLPLLLLTSFTTPSSSSSSEAFIFGGCSQAKFTPGSAYESGVNSALTTIVNAAMFLSYNNLTVPPSSSSQDTPIYGLFQCRGDLAATDCSRCVARAVSQLGTICPDSTGGALQLDGCFVKYDDSKFLGVEDKTLVLKKCGPSIGFTSDVLTRRDAVLAYLETSDGIYKTFRTTGSGDLQGMAQCVGDLSATECQDCLSNAIGRIRVECGPAQWGQVYLAKCYARYSQGGDYSPGGNGEHKNNKNDDELQKTLAIIVGLIAGVALLIIFISFLTKLCKKDKGGK 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1306 293 Pfam Salt stress response/antifungal 178 237 IPR002902 -
Lele54g1306 293 Pfam Salt stress response/antifungal 37 133 IPR002902 -
Lele54g1306 293 ProSiteProfiles Gnk2-homologous domain profile. 137 240 IPR002902 -
Lele54g1306 293 FunFam Cysteine-rich repeat secretory protein 60 157 238 - -
Lele54g1306 293 ProSiteProfiles Gnk2-homologous domain profile. 30 136 IPR002902 -
Lele54g1306 293 Gene3D - 155 238 IPR038408 -
Lele54g1306 293 Gene3D - 29 136 IPR038408 -
Lele54g1306 293 FunFam cysteine-rich repeat secretory protein 3 29 136 - -
Lele54g1306 293 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 3 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1306 Lele-ChrLele54 18211491 18213415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1306 2 236 Pollen Coat Proteome AT4G20670 25.769 1.01e-16 76.6