Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1282 ATGTGGGAGGGGCCCACGTGGGGATCGAGAATGGGAACACGTGTCAAAATCACATGTGTGGGGACCAGTTACAGCTGAGAGCGAAAGAGCCCCGATCCCCAATGCTCAGATTCTTCACCATTCATAGCGTCTGCCTCATCTTCATCCTCACCCTCTGGTTTTCTGAGCACCCCCGCTAATCGAAGGCAGAGAAATCACTCTCAATCGTCAAAACCCCCCTCCGAATCTGAAACTAAGTCTTCTGCCCCAAATCACGAGGAAAAGCTACCAGCCATGAAAAGAGAGCATCATCAGCTTGGTCCCAGTCCGGGCGACTCATTCATGTCCGCTAGCTCTAGCGGCAAATCAAAGCTATGGGAAGACGAGGCTCAAGACGGTGGCATGGACGAGCTTCTCGCCGTGCTTGGCTACAAGGTAAGGTCGTCCGACATGGCCGATGTTGCCCAGAAGCTTGAACAGCTTGAAGAAGCTATGGGTAATGTTCAGGGCGGTATCTCTCAACTCTCCTCCGAACATGTTCATTACAACCCTTCTGATCTATCTACCTGGCTTGAAAGCGTGCTTTCTGAGCTCAACCCGCCTCCCAATTTCGACTCTTTGACTGCCGTCGCCGGCGCCGTCTCTGCGCCACAACTCCCTCCGCCTCTGCCTCACCCGGCGGAATCATCCACTATTACCTCCAGTGATTTCACCGACCACAGCCAGCAGCAACATTTGAATCCTCTGCATAAGCACCAAGACAGCTTAATCTTCGAAGACGCATCTTCCTCAGATTATGATCTCAAGGCTATTCCAGGAAAAGCTATCTACAGCAGTCAAACTCAAACCCAGCACCAGCAGCAACTCGAATCCTCTTCCCGAGAAAGCAAACGTTTGAAACCCTCTTCTACTGCGTTCAACCAAGCATTGTTCTCGTCCTCTCCTCTGGGGTCTTTTACCTTGCCCAACGAGCCAACTCGTCCGGTTGTCCTCGTCGATTCACAAGAAAACGGAATTAGACTCGTTCATGCATTGATGGCTTGCGCGGATGCCGTACACCAGAACAATTTCGCTCTGGCAGAAGCTTTGGTCAAACAAATCGGATTCCTCGCGGTGTCTCAGGCCGGAGCTATGCGTAAGGTTGCGACCTACTTCGCCGAAGCGCTTGCTCGCCGTATATACCGGCTCTACCCAGAAAACCCCCTCGACCATTCTCTTTCCGACATGCTTCAGATTCATTTCTACGAGACCTGTCCATACCTCAAATTCGCACATTTCACTGCTAACCAAGCCATCCTCGAAGCCTTCGAAGGCAAAAGACGAGTTCATGTCATCGATTTCAGTATGAATCAAGGGATGCAATGGCCGGCTCTCATGCAAGCACTGGCTCTCCGACCTGGAGGCCCACCGGCGTTCCGGTTAACAGGAATCGGACCACCCGCTCCGGATAATTCGGATCACCTTCAGGAAGTGGGTTGGAAACTCGCTCAGCTAGCAGAAACGATTCACGTTGAATTTGAGTACAGAGGGTTCGTGGCCAACAGTTTAGCTGATCTAGATGCTTCTATGCTCGACCTTAGACCGAGTGAGGTTGAGGCAGTGGCTGTTAACTCGGTGTTCGAGCTTCACAAATTGTTGGCCCGACCCGGTGCGATCGAGAAGGTGTTATCGGTGGTGAAGCAGATGAAGCCGGAGATTGTCACCGTCGTAGAGCAAGAAGCGAACCACAACTGTCCGGGTTTCCTGGACCGGTTCACCGAGTCACTGCACTATTACTCGACCCTGTTCGACTCGTTGGAGGGATCGGTGGACACTCAAGATAAGATCATGTCGGAGGTGTATCTGGGGAAGCAAATCTGTAACGTGGTTGCCTGTGAAGGGGTGGACCGGATTGAGAGGCACGAGACACAGAGTCAGTGGAGGAACCGGTTGGGTTCTGCCGGGTTTACATCGGCTCACCTGGGCTCCAACGCTTTCAAGCAAGCAAGCATGCTTCTGGCTCTCTTCGCCGGCGGAGATGGTTACAGAGTAGAAGAAAACGGCGGGTGCCTGATGCTGGGTTGGCATACTCGGCCATTGATCGCTACATCGGCGTGGCGACTCGCCTAG 2088 0.5278 MWEGPTWGSRMGTRVKITCVGTSYSXERKSPDPQCSDSSPFIASASSSSSPSGFLSTPANRRQRNHSQSSKPPSESETKSSAPNHEEKLPAMKREHHQLGPSPGDSFMSASSSGKSKLWEDEAQDGGMDELLAVLGYKVRSSDMADVAQKLEQLEEAMGNVQGGISQLSSEHVHYNPSDLSTWLESVLSELNPPPNFDSLTAVAGAVSAPQLPPPLPHPAESSTITSSDFTDHSQQQHLNPLHKHQDSLIFEDASSSDYDLKAIPGKAIYSSQTQTQHQQQLESSSRESKRLKPSSTAFNQALFSSSPLGSFTLPNEPTRPVVLVDSQENGIRLVHALMACADAVHQNNFALAEALVKQIGFLAVSQAGAMRKVATYFAEALARRIYRLYPENPLDHSLSDMLQIHFYETCPYLKFAHFTANQAILEAFEGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAPDNSDHLQEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLDLRPSEVEAVAVNSVFELHKLLARPGAIEKVLSVVKQMKPEIVTVVEQEANHNCPGFLDRFTESLHYYSTLFDSLEGSVDTQDKIMSEVYLGKQICNVVACEGVDRIERHETQSQWRNRLGSAGFTSAHLGSNAFKQASMLLALFAGGDGYRVEENGGCLMLGWHTRPLIATSAWRLA 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1282 695 Coils Coil 151 171 - -
Lele54g1282 695 ProSiteProfiles GRAS family profile. 325 693 IPR005202 -
Lele54g1282 695 MobiDBLite consensus disorder prediction 270 292 - -
Lele54g1282 695 Pfam GRAS domain family 334 693 IPR005202 -
Lele54g1282 695 SMART DELLA_2 129 201 - -
Lele54g1282 695 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 272 689 IPR005202 -
Lele54g1282 695 MobiDBLite consensus disorder prediction 21 79 - -
Lele54g1282 695 Pfam Transcriptional regulator DELLA protein N terminal 129 195 IPR021914 -
Lele54g1282 695 MobiDBLite consensus disorder prediction 208 249 - -
Lele54g1282 695 MobiDBLite consensus disorder prediction 221 243 - -
Lele54g1282 695 MobiDBLite consensus disorder prediction 80 100 - -
Lele54g1282 695 Gene3D - 127 191 IPR038088 -
Lele54g1282 695 MobiDBLite consensus disorder prediction 21 123 - -
Lele54g1282 695 FunFam DELLA protein GAI 127 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1282 Lele-ChrLele54 18047823 18053864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1282 92 695 GRAS Transcription Factor Family AT2G01570 65.446 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele54g1282 GRAS 3.6e-136 CL0063