Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1264 ATGGAGCCTGATGGCACCACCTCCAACAACGGAGCTGTGTTCTCGCATTGCCTCCGAATAAACATGGAAGAAACTCATCACAAGGTGGTGGCGCCACCTCGCCGGACCACCCTGGAGAAGCTGACTGCGAAGCTGAAAGAAATGTTCTTCCCCGACGACCCTCTTCGCCAATTCAAGGGTCAGCCATTGAAGAAGAAGCTGGTCCTGGCCGCCCAGTATTTCTTCCCTATCCTTCAATGGGGTCCCAATTACAGCCTTACTCTCTTCAAATCCGACATCGTTTCAGGCCTCACCATTGCCAGCTTGGCCATCCCTCAGGGAATCAGTTACGCTAAGCTAGCAAGCCTTCCTCCGATTGTGGGACTCTATTCGAGCTTTGTGCCTCCTCTGGTTTATGCCGTTCTGGGAAGTTCAAGGGACCTCGCGGTGGGACCTGTGTCTATAGCGTCTCTTGTTCTGGGGTCGATGCTGAGGCAAGAGGTGTCCCCAGCTTCAGACCCTGTTCAGTTTCTTGAGCTAGCTTTCACTTCTACCTTCTTCGCTGGTCTCTTTCAAGTGTCTCTTGGAATCCTAAGGCTAGGTTTCATCATTGAATTCCTATCAAAGGCGATTCTGATTGGGTTTATGGCGGGAGCGGCCATTATCGTTCATGGGGTTTTGCTTCTTGGTGTTACTCCTCCTGGCAAGACACGTTAGCATAAGGAAGCCAAAGCTTTTCTGGGTCTCAGCTGGAGCTCCTCTTGTGTCTGTGATTATCTCTACCCTTCTGGTGTTTGCATTAAAGGCTCAGCATCATGGTATCACTGTTATAGGAAAATTGCAAGAAGGTCTAAATCCTCCTTCATGGAATATGCTGCTCTTTCATGGAACTCATCTGGGTCTTGTACTCAAAACTGGGCTTATCACTGGCATCTTGTCACTCACTTTGGAAGGACTTTTGCAGCTCTCAAGAACTACAAAGTGGATGGAAATAAGGAGATGATGGCAATCGGCTTCATGAATGTGGTTGGCTCCTTCACTTCCTGCTACGTTACTACAGGCTCTTTCTCTAGATCAGCTGTCAATAACAATGCGGGATCAAAATCAGCTGTGTCGAATATAGTAATGTCTGTGACAGTTATGGTGACACTCCTGTTTCTCATGCCACTGTTTCAATACACTCCGAATGTTGTACTAGGAGCAATCATAGTCACAGCAGTAATTGGTCTCATTGATATCCCTGCTGCTTATTACATCTGGAAGGTAGACAAATACGATTTCATCGTGATGCTCACCGCTTTCTTCGGCGTCATTTTTATCTCTGTTGAAGAAGGCCTCGCTCTTGCAGTAAGTACACGTTTCACTATTTCTTATGACTTTCAAATTCTAGGTGTTCCTCAAAAACAGGCAAAGGTTTATGATATTATTGATCAGGTTGGGTTGTCAATCTTGAAGATCCTCCTGCAAGTTACAAGGCCTAAGACAGTGATGTTGGGCAACATACCAGGTACAGACATATATCGAAATGTTGATCAATACGAAGAAGCTGTGAAGTTGCCTGGTTTTCTCATTTTAAGCATCGAGGCTCCCATCAATTTCGCAAACATCACATATCTCAACGAGAGGATCTTACGATGGATAGAAGAATATGAAGAGGAAAATAACATAAAGAAAAACTCAAGCCTTCGATATGTGATTCTGGAAATGTCAGCTGTGAGCAAAGTAGACACAAGTGGAGTCTCACTTTTCAGAGAACTGAAACAAGCACTGGAAAACAAGGGCATTGTGTTGGTGAATCCTCTGGGTGAGGCTATGGAGAAACTGAAAAAAGCAGATGAAGGCAGTGACTTGATAAGAGAAGATAACCTTTTCTTAACCGTTGGGGAGGCCGTGGCTTCGCTTTCATCAACGACGAAGGGCCAAGCATCAAATATGGAAGAAGGGGCTCACTTCTGA 1935 0.4568 MEPDGTTSNNGAVFSHCLRINMEETHHKVVAPPRRTTLEKLTAKLKEMFFPDDPLRQFKGQPLKKKLVLAAQYFFPILQWGPNYSLTLFKSDIVSGLTIASLAIPQGISYAKLASLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPASDPVQFLELAFTSTFFAGLFQVSLGILRLGFIIEFLSKAILIGFMAGAAIIVHGVLLLGVTPPGKTRXHKEAKAFLGLSWSSSCVCDYLYPSGVCIKGSASWYHCYRKIARRSKSSFMEYAALSWNSSGSCTQNWAYHWHLVTHFGRTFAALKNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGSFSRSAVNNNAGSKSAVSNIVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAAYYIWKVDKYDFIVMLTAFFGVIFISVEEGLALAVSTRFTISYDFQILGVPQKQAKVYDIIDQVGLSILKILLQVTRPKTVMLGNIPGTDIYRNVDQYEEAVKLPGFLILSIEAPINFANITYLNERILRWIEEYEEENNIKKNSSLRYVILEMSAVSKVDTSGVSLFRELKQALENKGIVLVNPLGEAMEKLKKADEGSDLIREDNLFLTVGEAVASLSSTTKGQASNMEEGAHF 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1264 644 FunFam Sulfate transporter 31 485 630 - -
Lele54g1264 644 ProSitePatterns SLC26A transporters signature. 118 139 IPR018045 GO:0008271|GO:0008272
Lele54g1264 644 PANTHER SULFATE TRANSPORTER 308 631 IPR001902 GO:0016020|GO:0055085
Lele54g1264 644 Pfam Sulfate permease family 89 216 IPR011547 GO:0016020
Lele54g1264 644 Pfam Sulfate permease family 310 425 IPR011547 GO:0016020
Lele54g1264 644 Pfam STAS domain 506 623 IPR002645 -
Lele54g1264 644 ProSiteProfiles STAS domain profile. 505 627 IPR002645 -
Lele54g1264 644 SUPERFAMILY SpoIIaa-like 511 627 IPR036513 -
Lele54g1264 644 Gene3D STAS domain 485 630 IPR036513 -
Lele54g1264 644 CDD STAS_SulP_like_sulfate_transporter 506 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1264 Lele-ChrLele54 17955047 17960286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1264 310 628 Inorganic Solute Cotransporters AT1G23090 66.978 1.32e-138 412