Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1259 ATGATCGCTGAACGCCGATCGCTTTGTATGAGGAGGTCAACTGAAAGTCTTCAAAAACGGATTTCACTGAAGAGAACAGAGGAAAAAATTGATACAGGTCCAGTTGTGCTCATTCTATCTCTAACTCTTTTTTCTATTTTGACTGATTACCTGAGCATGTCAAGCAAAGTCGAGAGAATGCTTGACAAGGATTTTTTCACTGAGTATGGGGAGGCAAGTCGGTATGAAATTCAAGAAGTTGTTGGCAAGGGCAGCTATGGTGTTGTTGCATCCGCAGTTGATACACACAGTGGAGAGAGGGTGGCTATCAAGAAGATGAACAATGTATTTGAACATGTCTCTAGTGCCACTCGCATCCTTCGGGAAATAAAGCTCCTTCGACTGCTCAAACATCCAGATATAGTAGAAATAAAGCACATAATGCTTCCTCCATGCCAAAGAGAATTTGAAGACATTTATGTTGTGTTCGAGTTAATGGAATCTGATCTTGATGAAGTTATTGAAGCAAACCATGATCTCACTCCTGGACATTACCAATTCTTCTTGTACCAGCTTCTTCGAGCTCTAAAATACATACATTCAGCGAATGTCTTCCATCGAGACTTGAAACCAAAAAACATTCTGGCTAATGCAGACTGCAAACTAAAGATTTGTGATTTTGGGCTTGCCCGTGCATCATTTGATGAGGCCCCATCTGCTATTTTTTGGACAGATTATGTTGCGACTCGATGGTACCGTGCTCCTGAACTATGTGGCTCTTTTTCCTCCAAGTACACCCCTGTCATAGATATCTGGAGCATAGGATGTATTTTTGCGGAAATGCTAACTGGGGAGCCTTTATTTCCCGGAAAGAATGTGAGGCATCAATTGGATCTCATAACTGATCTGCTTGGAACTCCTTCTGTTGAATGCATTGCAAGGATTCGGAATGAAAAAGCTAGAACGTATTTAAATAGCATGGGGAGAAAGCCATCCATTCCTTTATCACAAAAATTCCCTTATGCAGACCCAATGGCTCTTCGTTTACTTCAGCGCTTGCTTGCGTTTGATCCTATGGAGCGTCCGTCTGCCGAAGAGGCACTAGCTGATCCCTATTTTCATGGGTTGGCAAATTTGGCTGATGAACCATCCATGAAACCAATTTCAAAGTTTGAGTTCGAGTTTGAAAGAAGAAAATTGACCAAAGATGATGCAAGAGAACTAATATATAGAGAGATTTTAGAGTACCATCCAGAGATGCTGCAGGAGTATGTTCACGGTGCGGGGAAGACTAGCTTTATGTATCCCAGTGGAGTTGATGGCTTCAAGCACCGATTTGCTGATCTTGAGGAAAATAATAGCAGAGGAGAAAGAAGCACACTGCTTTATAGGAAATATGCCTCATTGCCCAGGGAACGGGTTTGTGCGGCTGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGACGGACAGAAATTTACTTAAGAAGGAGAATGCAACTTCTGTTGTGCGTGCAACCATTCTGAGTCCTCCAAAGTCCCGGAATGGTAAAGAAATGGAAAATGCTCGCGGAAACTCATTAATAATGCAGAACAACCGATGCAAAACAGCTTACGAGGGTCATAGACTTGTAAAGAGTGCTAGTCTGAATACTTCTATGTGGGCAGTTGTTATGGAACCAAAACCAGGAAGTAAGTTTTAA 1677 0.4246 MIAERRSLCMRRSTESLQKRISLKRTEEKIDTGPVVLILSLTLFSILTDYLSMSSKVERMLDKDFFTEYGEASRYEIQEVVGKGSYGVVASAVDTHSGERVAIKKMNNVFEHVSSATRILREIKLLRLLKHPDIVEIKHIMLPPCQREFEDIYVVFELMESDLDEVIEANHDLTPGHYQFFLYQLLRALKYIHSANVFHRDLKPKNILANADCKLKICDFGLARASFDEAPSAIFWTDYVATRWYRAPELCGSFSSKYTPVIDIWSIGCIFAEMLTGEPLFPGKNVRHQLDLITDLLGTPSVECIARIRNEKARTYLNSMGRKPSIPLSQKFPYADPMALRLLQRLLAFDPMERPSAEEALADPYFHGLANLADEPSMKPISKFEFEFERRKLTKDDARELIYREILEYHPEMLQEYVHGAGKTSFMYPSGVDGFKHRFADLEENNSRGERSTLLYRKYASLPRERVCAAEEEEEEEEEETDRNLLKKENATSVVRATILSPPKSRNGKEMENARGNSLIMQNNRCKTAYEGHRLVKSASLNTSMWAVVMEPKPGSKF 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1259 558 Gene3D Transferase(Phosphotransferase) domain 1 161 389 - -
Lele54g1259 558 ProSitePatterns MAP kinase signature. 110 213 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lele54g1259 558 ProSiteProfiles Protein kinase domain profile. 75 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g1259 558 FunFam Mitogen-activated protein kinase 161 389 - -
Lele54g1259 558 MobiDBLite consensus disorder prediction 469 488 - -
Lele54g1259 558 ProSitePatterns Protein kinases ATP-binding region signature. 81 105 IPR017441 GO:0005524
Lele54g1259 558 SUPERFAMILY Protein kinase-like (PK-like) 71 371 IPR011009 -
Lele54g1259 558 SMART serkin_6 75 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g1259 558 Gene3D Phosphorylase Kinase; domain 1 91 412 - -
Lele54g1259 558 Coils Coil 469 491 - -
Lele54g1259 558 CDD STKc_TDY_MAPK 74 411 - -
Lele54g1259 558 Pfam Protein kinase domain 75 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g1259 558 FunFam Mitogen-activated protein kinase 64 168 - -
Lele54g1259 558 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 74 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1259 Lele-ChrLele54 17929642 17936923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1259 61 558 MAP Kinase Gene Family AT3G18040 69.880 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele54g1259 Pkinase 3.4e-67 CL0016