Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1243 ATGTCTATGAGCATTTCCGCCGTTGCGTCACCGCCTAACACGCCGGCCCCTCAGTGGAACGAGCGATTCAGTATCCCCTTGGCACACCCCGGGGAGCATTTGGAATTTCGAGTAAAAGAAGACGACGTATTTGGTGCTCAGCTTGTGGGAACTGTCAATATTCCTGCACAGAGAATTGCTTCCGGTGAGTTTATCGCCGGATGGTTCCCCATTCTTATCGCCGGATGGTTCCCCATTCTTGGTTCTTCCGGTAAGCCTCACAAGCCAGACACCGCTCTTCGTATAGAAATGAAGTTCATAGCCGTGGAAGAGAACTTGTACCGGCGAGGCATTGCTATAGCAAGATACCTGAAAGGGTTTCCCAAAAGTGTTGATATTGCTCAGTCTCAGAGCCAGACAATGCAAACGATGTATGATGTTGTTGCAAGAGAATTAAAATCAATGCAACTTGTTGATTTGCACCCACAAGATTACCTCAACTTCTATTGCCTTGGTAACCAGGAAGAATTCCATGAAGAGAACTCAAGTGCAAATTGTACTTCGGAAAAGACATCCTTATGGTCAGATTTATGGTTACAGAATTTCACTGTGGGCAGAGCAGAGCATCTTGGGATGTTAGAGGCAAATTTTGAAGAATCAGAGAGTTTGGAATGTGTGCGTAAGGTGAATTCCATTGCGGAAGAGAATTGGAGAAGATACACGTCAGAGGACTTTTCTTCATTGCAGGGACATATCCTTAAGTATCCTGTACAAGTAGATGCTGATGGGAAGGTTAGCCCTTTCCCTGAATATGAGACTTCTATGGATGTTGGCGGCAAAGTAATGGGATCTCATTTCCCTACAATTCCTGATATTCTAATAACATAG 867 0.4487 MSMSISAVASPPNTPAPQWNERFSIPLAHPGEHLEFRVKEDDVFGAQLVGTVNIPAQRIASGEFIAGWFPILIAGWFPILGSSGKPHKPDTALRIEMKFIAVEENLYRRGIAIARYLKGFPKSVDIAQSQSQTMQTMYDVVARELKSMQLVDLHPQDYLNFYCLGNQEEFHEENSSANCTSEKTSLWSDLWLQNFTVGRAEHLGMLEANFEESESLECVRKVNSIAEENWRRYTSEDFSSLQGHILKYPVQVDADGKVSPFPEYETSMDVGGKVMGSHFPTIPDILIT 288
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1243 288 Pfam C2 domain 12 71 IPR000008 -
Lele54g1243 288 ProSiteProfiles C2 domain profile. 1 69 IPR000008 -
Lele54g1243 288 Pfam Phospholipase D C terminal 208 277 IPR024632 -
Lele54g1243 288 PANTHER PHOSPHOLIPASE D 13 111 IPR015679 -
Lele54g1243 288 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 100 IPR035892 -
Lele54g1243 288 Gene3D C2 domain 9 109 IPR035892 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele54g1243 Lele-ChrLele54 17844287 17847023 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1243 92 178 Phospholipase D Gene Family (Wang group) AT4G35790 45.556 3.44e-13 67.8