Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1240 ATGGCTTTGCCGTCCAGTTCTGCGCGTGGATTGTTCCTGTTCGTCGTACTTTTGAGCTTGGGTTCACGAAGCTGTTATGGATTCCGGACTCTTGGGTTCGCTATGCATCACCGGTATTCAGATCCCGTTAAGGGAATTCTGGGCATTCACGACCTACCTGCCAGGGGAAGTCGTGAGTACTATGTGGCTATGTCTCACAGAGACCGCCTTGCCCGAGGTCGTGCACTCGCCGGTGTAGATCCGATGGCTCTGACGTTCGCCTCCGGCAACGAGACTTATCGGATTGCCTCCTTGGGATTTTTGCATTACGCCAATGTTTCTGTTGGGACACCACCAGTATGGTTTCTTGTGGCATTAGACACTGGCAGTGACTTGTTCTGGTTGCCATGCAACTGTACCAACATAAATTGCGTCCATGCCTTGGGGACACCAAAAGGACAGAGACTGAAACTGAACATCTACGATCCTCTTTCATCCTCGACAAGCAAGAATGTTCCATGTAACAGCACCATATGTGGGTATAGGAAACAGTGTCCTTCATCTAACAGCAGTTGTCCATATCAAGTTCGCTATGGTACAAGGAACACGTCTTCAACTGGAGTCCTAGTGGAAGATGTCTTGCACTTAACTACAGATGATGATCAGACCAAAGAAGTTGAGGCGCGTATTAATTTTGGATGTGGTAAAGTTCAAACAGGTTCATTCTTGACCGGCGCAGCACCAAATGGATTGTTGGGGCTTGGTATAGAGAATATATCAGTTCCGAGCATATTAGCTAAAGAAGGGCTCACTTCAAATTCTTTCTCTATGTGTTTTGGGCATGATGGTGTTGGAAGAATAACATTTGGAGATAATGGCATCTCAGACCAAAGAAAAACACGAATCAACCTTGGAGCATCCCATCCAAGTTACAACATCAATATCACTCAAATTATTGTCGGAGAAAAAACTATGGACTCTGAGTTCAATGCAATTTTTGACACTGGAACTTCATTTACATACCTAAACGATCCTGCTTATACAAACATTACGAGCAGTTTCAATTCCATGGTCAAAGGAAAACGTTATCAATTTGATTCTCATCTTGAAACGCCCTTTGAGTATTGTTATGAAAACACAACTAGCAATCAGACCAGTTTGGAATTTCCCTCCTTGAATATGAAAATGAAAGGGGGAGACGATTATTATGTTATGTATCCACTTGTTTATATTATTATTGAGGGGGTTGAAACTTTTAGCACAGTGATTTGCCTTGGCATCGTGAGAAGTTATAACGTGAATATAATAGGACAGAATTTCATGACTGGTTACCATGTTGTCTTTGATCGTGATAACATGATTCTGGGTTGGAAGAATTCCAGCTGTTATGATGACGAGGTCTCAAGTACATCATCAGCTGTAAACACCGCACATTCTCCAGCTGTTTCTCCAGTTGTTTCGCCTGCTATTTCTCCCGCACCTCCTGCAAAATCTGAACCCGTGATTAACCAGTCTGAAAGTTCGAGGCCGCAGCTGCCTAATCCCTCATTCAAGACCAAACCTTTTGTGGTTACGTTTCTACTGGTTCTTTTTCCGGACAATTCCATAAAATCATTAACTCTTCTCGTTAAAATGGCTATCATAATTGCAGTCATGAGCTCAATGATTTTGTTCTCAGTGGTTCCATTAGGTAATTCGCTTAGCTTAAACTACTATGAGAAGACATGCCCTGATCTGGAGTTCATTGTTGCTAAGGTCGTAAAGGAATCAACTTCTAAGGACAAAACTGTTCCTGCAGCACTTCTTCGAATGCACTTCCATGATTGTTTCATTAGGGGATGTGATGCCTCAGTGCTGCTAAACTCAAAAGGAAACAACAAAGCAGAAAAAGATGGGCCACCAAATATTTCTTTGCATGCGTTCTATGTCATCGACAATGTGAAGAGTGAAGTAGAAAAGTCATGCCCTGGTGTGGTCTCGTGTGCTGACATCCTAGCACTAGCAGCAAGGGATGCAGTTTTTCTGTCTGGAGGTCCAGTTTGGGATGTGCCTAAAGGAAGAAAGGATGGTAGAACATCTATGGCCAGTGAAACCAGACAATTGCCAGCACCAACCTTCAGCATATCACAGTTGCAGCAGACCTTCTCTCAGAGAGGTCTGTCAACAGAGGATCTGGTCGCGTTGTCAGGAGGACATACTTTAGGTTTCTCTCATTGTTCATCCTTCCAGAACAGAATTCACAATTTCAATGCTACACACGACGTGGATCCTTCATTAAATCCATCCTTTGCTGGAAAATTGAAGTCAATTTGTCCGCTCAAAAATCAGGCCAAGAATACAGGCACCACCATGGACCCTTCAACTACTACTTTCGATAACACATATTTCAAGGCAATCCTCCAAGGGAAGAGCTTATTTTCTTCTGATCAAGCTCTGCTAGATACCCCAAAGACCAAGGAATTGGTGTCTAAGTTTGCTACCTCACAAGAGGCCTTCTTCAAATCTTTTGCCAATTCCATGATCAAAATGAGTAGCATCAATGGTGGACAAGAGATTAGGAATAACTGCAGGTTTATCAACTAA 2562 0.4305 MALPSSSARGLFLFVVLLSLGSRSCYGFRTLGFAMHHRYSDPVKGILGIHDLPARGSREYYVAMSHRDRLARGRALAGVDPMALTFASGNETYRIASLGFLHYANVSVGTPPVWFLVALDTGSDLFWLPCNCTNINCVHALGTPKGQRLKLNIYDPLSSSTSKNVPCNSTICGYRKQCPSSNSSCPYQVRYGTRNTSSTGVLVEDVLHLTTDDDQTKEVEARINFGCGKVQTGSFLTGAAPNGLLGLGIENISVPSILAKEGLTSNSFSMCFGHDGVGRITFGDNGISDQRKTRINLGASHPSYNINITQIIVGEKTMDSEFNAIFDTGTSFTYLNDPAYTNITSSFNSMVKGKRYQFDSHLETPFEYCYENTTSNQTSLEFPSLNMKMKGGDDYYVMYPLVYIIIEGVETFSTVICLGIVRSYNVNIIGQNFMTGYHVVFDRDNMILGWKNSSCYDDEVSSTSSAVNTAHSPAVSPVVSPAISPAPPAKSEPVINQSESSRPQLPNPSFKTKPFVVTFLLVLFPDNSIKSLTLLVKMAIIIAVMSSMILFSVVPLGNSLSLNYYEKTCPDLEFIVAKVVKESTSKDKTVPAALLRMHFHDCFIRGCDASVLLNSKGNNKAEKDGPPNISLHAFYVIDNVKSEVEKSCPGVVSCADILALAARDAVFLSGGPVWDVPKGRKDGRTSMASETRQLPAPTFSISQLQQTFSQRGLSTEDLVALSGGHTLGFSHCSSFQNRIHNFNATHDVDPSLNPSFAGKLKSICPLKNQAKNTGTTMDPSTTTFDNTYFKAILQGKSLFSSDQALLDTPKTKELVSKFATSQEAFFKSFANSMIKMSSINGGQEIRNNCRFIN 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1240 853 PRINTS Haem peroxidase superfamily signature 777 792 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 PRINTS Haem peroxidase superfamily signature 670 682 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 PRINTS Haem peroxidase superfamily signature 652 669 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 PRINTS Haem peroxidase superfamily signature 717 732 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 PRINTS Haem peroxidase superfamily signature 591 605 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 Gene3D Acid Proteases 91 284 IPR021109 -
Lele54g1240 853 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 117 128 IPR001969 GO:0004190|GO:0006508
Lele54g1240 853 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 324 335 IPR001969 GO:0004190|GO:0006508
Lele54g1240 853 SUPERFAMILY Heme-dependent peroxidases 560 853 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 PRINTS Plant peroxidase signature 716 728 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 PRINTS Plant peroxidase signature 791 808 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 PRINTS Plant peroxidase signature 569 588 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 PRINTS Plant peroxidase signature 670 685 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 PRINTS Plant peroxidase signature 775 790 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 PRINTS Plant peroxidase signature 651 661 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 PRINTS Plant peroxidase signature 831 844 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 PRINTS Plant peroxidase signature 593 613 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 PRINTS Plant peroxidase signature 632 645 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 Gene3D Peroxidase, domain 2 695 836 - -
Lele54g1240 853 FunFam Peroxidase 695 836 - -
Lele54g1240 853 CDD secretory_peroxidase 560 852 IPR033905 GO:0004601|GO:0042744
Lele54g1240 853 Pfam Xylanase inhibitor N-terminal 103 284 IPR032861 -
Lele54g1240 853 Gene3D Acid Proteases 289 456 IPR021109 -
Lele54g1240 853 ProSiteProfiles Peptidase family A1 domain profile. 102 451 IPR033121 -
Lele54g1240 853 MobiDBLite consensus disorder prediction 478 507 - -
Lele54g1240 853 FunFam Peroxidase 563 705 - -
Lele54g1240 853 MobiDBLite consensus disorder prediction 491 507 - -
Lele54g1240 853 ProSiteProfiles Plant heme peroxidase family profile. 559 853 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 Pfam Xylanase inhibitor C-terminal 304 451 IPR032799 -
Lele54g1240 853 ProSitePatterns Peroxidases proximal heme-ligand signature. 717 727 IPR019793 -
Lele54g1240 853 SUPERFAMILY Acid proteases 96 456 IPR021109 -
Lele54g1240 853 Gene3D - 563 853 - -
Lele54g1240 853 Pfam Peroxidase 577 821 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 FunFam Aspartyl protease family protein 1 89 284 - -
Lele54g1240 853 PANTHER PEROXIDASE 25-RELATED 544 841 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele54g1240 853 FunFam Aspartyl protease family protein 1 287 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1240 Lele-ChrLele54 17825401 17832401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1240 548 852 Peroxidase AT5G42180 66.667 7.54e-149 439