Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1237 ATGGTGATCGAGGAGGACGTTGAGAGCTGCGATAGTCGAGTCGTGCAGTCACAGAAAGCCCATCCCCGTCATCACAGCCAGAAATTGGAAGTGTACAATGAGGTGCTCCGTCGAATTCGAGAGTCCAATTATGAGGAGGCCAATACTCCGGATTTTGATGATCAGCTATGGCTTCATTTTAATCGTCTTCCTGCTAGGTATGCATTTGATGTGAACGTGGAGAGAGCAGAAGATGTTCTTGCTCATATGAGACTACTCAAGTTGGCAGAGGACCCTGCTAATCGACCTGCAGTTCAAGTTCGCTTAGTACAGGTACAACCCTTTGATAGTGCAAATTATGGTGACTCTATGCACTCAGATCCCTCTGAGAATGAAGATGCACAGAACTCTTTTAACTATTCTTTTAAACAAGGAATTCATCTGCCACCTACTTTCGGTTCATCCTCTAATCTTGAAGCTCTTTCACGTAAAAGAAGTAAAAATAATATTGAAGATGGGGACAGTGCTCCGGATGTGATACCATATTCTTTGCAGCCCATGCATGAGATAACTTTTTCAACAATTGACAAGCTTAAACTCCTTAGTCAGTTAACCGCATTACTTGGGGAGATTGGATTGAACATTCAAGAAGCTCATGCATTTTCCACCAACGATGGCTTTTCTCTTGATGTATTTGTTGTTGATGGTTGGCCTAATGAGGATACTGAGGAGCTCAAAGCTGTATTGGAAAAGGAAATTTTGAAATTTAAGGAGCAATATCTGTCAAAACAGAGCGCACATTATGCTGCCAATGACGATCATCAGGAAAGGATGGAACCTTTTCCTCCTTGCATAGAAATACCGTCTGATGGAACTGATGTCTGGGAAATTAATACGAACCTGTTGAAATTTGAAAACAAAGTTGGCTCTGGATCATTCGGTGATTTGTACAAAGGCACATATTGCAGCCAAATTGTGGCTATCAAAGTCCTCAAACCTGAGCGCACAAATACAGATATGTTGAGAGAGTTTGCACAGGAAGTTTATATCATGAGGAAGATTCGACACAGGAATGTTGTGCAATTCATGGGAGCATGTACTCGACCACCAAATCTGTGTATTGTTACTGAGTTCATGTCTAGAGGAAGCCTATATGACTTTCTGCACAAACACAGAGGTTTATTTAAGCTTCCATCTTTGCTAAAAGTGGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATCATACACAGGGACCTCAAGACTGCCAATCTGCTGATGGATGAAAATGAAGTGGTGAAGGTTGCTGATTTTGGGGTTGCCAGAGTGAAGATACAATCTGGAGTGATGACAGCTGAAACTGGAACTTACCGTTGGATGGCTCCAGAGGTCATTGAACACAAACCTTATGACCAAAAAGCAGATCTACCTTACTCTTACTTGACACCATTACAAGCAGCAGTAGGCGTGGTGCAAAAGGGTCTAAGACCTACAATCCCCAAGAGCACTCACCCAAGACTTTCTGAACTTCTCCAACGTTGCTGGCAACAAGATCCAAAAGATAGACCAGAATTCTCCGAGATAATAGAGATTCTTCAGCTGATAGCTAAAGAGGTTATTGATGAGAAAGGTGATCGGCACAAAGATAAATCGTCCCACGGCTTTCTCTCAGCACTTAAATGGGGCCATCACTGA 1686 0.4223 MVIEEDVESCDSRVVQSQKAHPRHHSQKLEVYNEVLRRIRESNYEEANTPDFDDQLWLHFNRLPARYAFDVNVERAEDVLAHMRLLKLAEDPANRPAVQVRLVQVQPFDSANYGDSMHSDPSENEDAQNSFNYSFKQGIHLPPTFGSSSNLEALSRKRSKNNIEDGDSAPDVIPYSLQPMHEITFSTIDKLKLLSQLTALLGEIGLNIQEAHAFSTNDGFSLDVFVVDGWPNEDTEELKAVLEKEILKFKEQYLSKQSAHYAANDDHQERMEPFPPCIEIPSDGTDVWEINTNLLKFENKVGSGSFGDLYKGTYCSQIVAIKVLKPERTNTDMLREFAQEVYIMRKIRHRNVVQFMGACTRPPNLCIVTEFMSRGSLYDFLHKHRGLFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVKIQSGVMTAETGTYRWMAPEVIEHKPYDQKADLPYSYLTPLQAAVGVVQKGLRPTIPKSTHPRLSELLQRCWQQDPKDRPEFSEIIEILQLIAKEVIDEKGDRHKDKSSHGFLSALKWGHH 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1237 561 PRINTS Tyrosine kinase catalytic domain signature 369 382 IPR001245 GO:0004672|GO:0006468
Lele54g1237 561 PRINTS Tyrosine kinase catalytic domain signature 406 424 IPR001245 GO:0004672|GO:0006468
Lele54g1237 561 PRINTS Tyrosine kinase catalytic domain signature 452 462 IPR001245 GO:0004672|GO:0006468
Lele54g1237 561 SUPERFAMILY ACT-like 180 246 IPR045865 -
Lele54g1237 561 SMART serkin_6 295 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g1237 561 Coils Coil 232 252 - -
Lele54g1237 561 ProSiteProfiles ACT domain profile. 182 260 IPR002912 -
Lele54g1237 561 Gene3D Transferase(Phosphotransferase) domain 1 374 553 - -
Lele54g1237 561 Gene3D Phosphorylase Kinase; domain 1 284 373 - -
Lele54g1237 561 FunFam Serine/threonine-protein kinase isoform 1 285 373 - -
Lele54g1237 561 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 155 533 - -
Lele54g1237 561 CDD STKc_MAP3K-like 301 529 - -
Lele54g1237 561 Pfam Protein tyrosine and serine/threonine kinase 295 529 IPR001245 GO:0004672|GO:0006468
Lele54g1237 561 MobiDBLite consensus disorder prediction 150 169 - -
Lele54g1237 561 SUPERFAMILY Protein kinase-like (PK-like) 275 529 IPR011009 -
Lele54g1237 561 ProSitePatterns Protein kinases ATP-binding region signature. 301 322 IPR017441 GO:0005524
Lele54g1237 561 CDD ACT_TyrKc 180 247 - -
Lele54g1237 561 ProSiteProfiles Protein kinase domain profile. 295 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g1237 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1237 Lele-ChrLele54 17808407 17813410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1237 2 560 MAP Kinase Kinase Kinase AT4G35780 67.535 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele54g1237 PK_Tyr_Ser-Thr 8.9e-59 CL0016