Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1236 ATGGCGACGACGTCGTATCGCATGTCCGGCTTCCTTCTCTCCCCCTCTCTCTGCTCCCCAAAACTTGATCATCATCCAAGAATTTCATTTCTGAAACCGGTGAACTCTCCTCAGGCACGGAGAGTTAGTGTTGTTAAATCCAGCTTTCTAAACTACTGTACAAAAGCTGCTCTGAACGGGAATTTGGAGACCGTCGTAGTTCCGATGTCGGTGCCAGTGCGTGTAGCACACGAGCTGCTTCTTGCTGGACATCGCTTTTTGGATGTGAGAACTCCCGAAGAATTCAAAGCAGGACACGCTCCAGGCGCAATTAACATACCATATATGTACAGAGTTGGATCAGGTATGACAAAGAATGCCAATTTCGTTGCAGAAGTCTCATCACGTTTTGGAAAAGATGATGAGATTATTGTTGGTTGTCAACTTGGTAAAAGGTCTATGATGGCTGCTACTGACTTAGTAGCTGCTGGATTTTCTGGAATTACAGACATAGCTGGTGGATTCGCTGCTTGGACTCAAAATGGACTTCCAACAGAACAGTGA 543 0.4586 MATTSYRMSGFLLSPSLCSPKLDHHPRISFLKPVNSPQARRVSVVKSSFLNYCTKAALNGNLETVVVPMSVPVRVAHELLLAGHRFLDVRTPEEFKAGHAPGAINIPYMYRVGSGMTKNANFVAEVSSRFGKDDEIIVGCQLGKRSMMAATDLVAAGFSGITDIAGGFAAWTQNGLPTEQ 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1236 180 Gene3D - 59 179 IPR036873 -
Lele54g1236 180 CDD RHOD 76 171 - -
Lele54g1236 180 Pfam Rhodanese-like domain 85 173 IPR001763 -
Lele54g1236 180 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 5 179 - -
Lele54g1236 180 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 69 179 IPR036873 -
Lele54g1236 180 ProSiteProfiles Rhodanese domain profile. 80 180 IPR001763 -
Lele54g1236 180 SMART rhod_4 70 177 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1236 Lele-ChrLele54 17801893 17803754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1236 69 177 Sulfurtransferasese or Rhodanese AT5G66170 45.946 6.34e-32 110