Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1224 ATGGTGATTTCTCATGAGAACAATGCAAACCCCGTGAAACCCTCAAGCTTGCAAGGATGCTTGGTCGGCGAGAAACGTAGGGCACTGGGCGCCTTCAATCAGAACCTCGTCCGCGTCGTTAACAAGAAGATAGCCGATCCAGTGCACCGACCAATTACGAGGAGATTTGCCGCACAAATTGCTCCCACAAAGCAGCCTCTCGCCGAGGAAAATAAGAAGTCGAATACATCAAGTTTAAACTCAAATGGATTTGGAGAATGCATATTTGTGGATGAAGAACACAAGTCAGTGAAGGACCACCCAGTACCCATGTCTTTAGAACAATCAGAAGAAGCAATGCAGACTGAAACAGATCAGATGAAGGAAGTTGAGATGGAGGATTTAGTTGAAGATCCTATCATGGACATTGATAGTAGTGATGTGAACAACCATCTTGCAGTTGTGGACTATGTTCAAGAACTTTATTCTTACTACAGAAAAATGGAGAGTAGTGGCTGCGTCTCACCAAATTATATGTCCCAACAATCTGACATTAACGAAAGGATGAGAGCTATACTAATTGACTGGCTCATTGAGGTGCAAGACAAGTTTGATCTCATGCATGAGACTTTGTTCCTTACAGTGAACCTAATAGATAGGTTTTTGGAGAAGCAATCAGTGGTAAGGAAGAGGCTTCAATTGGTGGGTTTAGTGGCCATGCTTTTGGCATGCAAGTATGAGGAAGTTTCAGTTCCTGTAGTGGAGGATCTGATACTTATATCGGACAAAGCATATACAAGGAAAGAAGTTCTTGAAATGGAGAAGTTGATGCTTAGCACATTGCAGTTTAACATGACAGTGCCCACACCATATGCGTTTATAAGAAGGTTTCTAAAGGCTGCTCATGCAGATAAAAATATGGAGTTGCTAGCTTTCTTCTTGATAGAGCTATCTCTTGTGGAGTATAGGATGTTGAAGTTCCCACCATCTTTGTTAGCTGCATCTGCAGTTTTTACAGCTCAATGCACCACCATCTTTGGTTTCAAGCAATGGAGCAAGACATGTGAATGGCACACAGGCTACTCAGAAGATCAACTCTTGGAATGCTCTAAATTGATGGTTGATTTGCACCAAAAGGCTGAAAAAGGAAAACTAACTGCTGTACATAGGAAGTATTGCACATCTAAACTCAACTATACTTCAAAATGTGAACCAGCAAGTTTTCTTGTGGCGAATCAATTATAG 1224 0.4167 MVISHENNANPVKPSSLQGCLVGEKRRALGAFNQNLVRVVNKKIADPVHRPITRRFAAQIAPTKQPLAEENKKSNTSSLNSNGFGECIFVDEEHKSVKDHPVPMSLEQSEEAMQTETDQMKEVEMEDLVEDPIMDIDSSDVNNHLAVVDYVQELYSYYRKMESSGCVSPNYMSQQSDINERMRAILIDWLIEVQDKFDLMHETLFLTVNLIDRFLEKQSVVRKRLQLVGLVAMLLACKYEEVSVPVVEDLILISDKAYTRKEVLEMEKLMLSTLQFNMTVPTPYAFIRRFLKAAHADKNMELLAFFLIELSLVEYRMLKFPPSLLAASAVFTAQCTTIFGFKQWSKTCEWHTGYSEDQLLECSKLMVDLHQKAEKGKLTAVHRKYCTSKLNYTSKCEPASFLVANQL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1224 407 PIRSF Cyclin_A_B_D_E 4 407 IPR039361 -
Lele54g1224 407 Gene3D - 167 279 - -
Lele54g1224 407 ProSitePatterns Cyclins signature. 183 214 IPR006671 -
Lele54g1224 407 Coils Coil 106 126 - -
Lele54g1224 407 FunFam G2/mitotic-specific cyclin-1 258 394 - -
Lele54g1224 407 SUPERFAMILY Cyclin-like 280 399 IPR036915 -
Lele54g1224 407 Pfam Cyclin, N-terminal domain 154 278 IPR006671 -
Lele54g1224 407 SMART Cyclin_C_2 281 399 IPR004367 -
Lele54g1224 407 Pfam Cyclin, C-terminal domain 281 397 IPR004367 -
Lele54g1224 407 SUPERFAMILY Cyclin-like 142 278 IPR036915 -
Lele54g1224 407 PANTHER CYCLINS 111 378 IPR039361 -
Lele54g1224 407 SMART cyclin_7 188 272 IPR013763 -
Lele54g1224 407 SMART cyclin_7 285 368 IPR013763 -
Lele54g1224 407 CDD CYCLIN 182 271 IPR013763 -
Lele54g1224 407 CDD CYCLIN 279 367 IPR013763 -
Lele54g1224 407 Gene3D - 154 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1224 Lele-ChrLele54 17739295 17743531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1224 1 403 Core Cell Cycle Gene Families AT1G20610 53.596 1.01e-154 442