Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1217 ATGCGACTTTGGGAGTTTCCAGATCAGTATGTCATGGAGCCCACGGATGGCTCTTCTGGTTCTTCTTTGACAGTGAGTCGAGTGGATGGCTCGATGAAGCTTATCGATGCGATTCCAGAATGCAACAAGCTTCGAGTACCTAAGATTTGGACAGTTTTCGGTGTGGCTGGGATGATAAGGCTTTTGGCTGGTAAGTGGAACAGTCCCACTTATTTGTCTATTTTTACTTTCTATGCCCACTATATGTTTGGAATTCATGCTGTTCTACCATATTGGGCAGAAAAAGACAGAGTTGGAGTTTTCCAAGCTGCTAAACGTTGCAGAGAAAACGTCTGGTCTGTTCTTCTCATATGCAACCAACTTAACACTGAGGTCACTAATAGGATAGGAACTCGCTTTAATATATTTATATTGCTGATATTTTCCCCCTTTTCAAGGAGAGGAACTGATCTTGCATTTTGGGAATCTACCTGTATTGTAGAGAAACTGCAGCATCCCTGCAAAAATGATGGCCATAATGATTCCTTTGCCCAGCGATTGAATGACCTTGTTGATGAATCTAGATTGCTTCCTCTTTGGAGACAGTCTGAGCCCCGATTTCTATGGAACAATTATTTGTTGGAAGTGCTCATTGATAACAAGGTGGGTTTAGGGGAAGGTTTTCATTACTTTCAAGCAGCCATTGGAAAGGATATTATTGATGTCACTTTGATTGCCAGGAGATGCACGAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGACCCTGATGGTTATGTTGCTAATTTTGTGGAAACTGAGCAAATTATGCAGTTCAATGGGTATACAGCATCGTTTGTTCAGATCCGTGGCTCAATCCCATTGCTTTGGGATCAAATTGTTGACCTGACGTATAAACCTAAGTATGAGTTATTGAGACTTGAGGAAGCTCCTCGAGTTATGGAACGGCACTTCCTAGATTTAAGGAAAAAATATGGGGCTGTCTTAGCTGTTGATCTTGTCAACAAGGTGAGAGAGGGTCGGCTGAATGAAAAATTTGGAAGCTCAATGCAGCATTTGGCTAGTGATGATGTATGGACTAGTGATGATGTAAGATATCTTCTATTAAATGAAAAGGGAGAGAAAATGAAGGAGCAGCTTGGAGTTGTCCGAACTAATTGTATTGATTGTCTGGATCGTACAAATGTAACTCAGAGCATGATTGGCCGAAATATGTTGGAATTCCAGCTTAGAAGGCTTGGGGTATTTGAGGCTGAAGAAACGATTACTTCGCATCCAAATCTAGATGAAAGCTTCAAGATCAGCACGCCTGCTCTAAAAGGAGACTTTGTCAGATATGGGCACCGTACAATGCGAGGAATACTAAAAGATGGATGTAGTGCTCTTATGCGCTATTATTTAAATAATTTTTGTGATGGAACAAAGCAGGATGCAATTGATCTCCTACAAGGACATTACATAGTTTCTGTCAGCAGAGATATGACTACCTCTTCTCAGAAAGGAGGAATCGAAGCTATAGCTTCCTTTCCTCTGGCTTTTTCTCTGGTTATGATTGGATTCGTCTTTGCAACCATGTCATTGAGGCAAGTTCGATACGATTTCCGGCATTTCTTTTTCTCTCTAATGTGGGCAAGCATTAGTATCGCAATAGCGGCATTTGTGAGGGCAAATGGTCGGGTTTTCTGCAACAGACCTCGCCTACACAAGCCACGGCGTTGA 1722 0.4199 MRLWEFPDQYVMEPTDGSSGSSLTVSRVDGSMKLIDAIPECNKLRVPKIWTVFGVAGMIRLLAGKWNSPTYLSIFTFYAHYMFGIHAVLPYWAEKDRVGVFQAAKRCRENVWSVLLICNQLNTEVTNRIGTRFNIFILLIFSPFSRRGTDLAFWESTCIVEKLQHPCKNDGHNDSFAQRLNDLVDESRLLPLWRQSEPRFLWNNYLLEVLIDNKVGLGEGFHYFQAAIGKDIIDVTLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMQFNGYTASFVQIRGSIPLLWDQIVDLTYKPKYELLRLEEAPRVMERHFLDLRKKYGAVLAVDLVNKVREGRLNEKFGSSMQHLASDDVWTSDDVRYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEFQLRRLGVFEAEETITSHPNLDESFKISTPALKGDFVRYGHRTMRGILKDGCSALMRYYLNNFCDGTKQDAIDLLQGHYIVSVSRDMTTSSQKGGIEAIASFPLAFSLVMIGFVFATMSLRQVRYDFRHFFFSLMWASISIAIAAFVRANGRVFCNRPRLHKPRR 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1217 573 ProSiteProfiles Sac phosphatase domain profile. 194 445 IPR002013 GO:0016791
Lele54g1217 573 Pfam SacI homology domain 184 367 IPR002013 GO:0016791
Lele54g1217 573 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 362 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1217 Lele-ChrLele54 17689775 17699069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1217 1 572 Acyl Lipid Metabolism Gene Families AT5G66020 55.732 0.0 674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0035 52 230511 235921 Lele54g1217 54 17689775 17699069 CCT
Lele54g1217 54 17689775 17699069 Lele54g1217 54 17689775 17699069 ECH
Lele54g1217 54 17689775 17699069 Lele55g0240 55 1472797 1482900 hybridization
Lele54g1217 54 17689775 17699069 Lele56g0229 56 1844110 1853420 hybridization