Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1203 ATGAGATTTGTTTTGTTTGTATTTGTGTTTGCCGAACAGCACATCATCATGCAGAAAATATGGCTTCTTGTGCTTGTGATGATTTTCTACTGCGTCATTTATTCAAACGGATTAAGTGGTGTTCCTACAAGACCCCGTTCCGTCAACATTGGGGCAATTCTATCTTTCAATTCAACCGTTGGAAAAGTCGCAAAAGTTGCGATCGATGCAGCAAAGGATGATATAAACTCCAACCCATCAGTTCTTAATGGAACTAAACTCAATATTTCATTCCAGGACACCAAATTCTCCACTGGTTTTCTCGGTATCATTGACTCATTATTATTGATGGAGAATGACACGGTGGCCATAATAGGCCCTCAATATTCAGTGATGGCACATGTGATTTCACACATAGCCAATGAGCTGCAAGTTCCCTTACTGTCATTTGCAGCAACAGACCCTACCTTGACTTCTCTTCAATTCCCATATTTTGTTAGGACAACACAGAGTGATCACTTTCAGATGGCTGCCGTGGCAGATATCGTTGACTACTATCAATGGAGAGATGTGATAGCAATCTACATTGATGATGATCATGGAAGAAATGGTATAGTTTCATTAGAAGATAAGCTAGCTGAGAAACGTTGTAAGATCTCATACAAAGCCCCTCTTAGGCCTAATAAGATAAACAGGGAAGAAATAAACAGTGCATTAGTTAAGGTCATTATAAGGGAGTCCAGGGTAATAGTCCTACACATATACCCTAGCTTTGGTCTTGATGTTCTTAGTGTGGCTGGGTCACTAGGCATGTTGGGAAGTGGGTATGTTTGGTTGGCCACTGATTGGCTTTCTACAGTTCTGGATACTGATCCATCAAGCTCAGCTCCACACATGAATGATCTCCAAGGGGTTATAACCTTGAGAATGTACACACCTGAATCTGGAATGAAGAAGAATTTCACTTCCAGGTGGAGTAATTTAATAAAGGAGAAAGCTCCTGATCAAAGTCCTTTCATGTGGAACACTCATGGCCTTTATGCCTATGACAGTGTTTGGGTCCTTGCATATGCACTTGATTCATTTTTCAACAGTGGAGGAACTTTATCATTTTCAAATGATTCCAGTCTAAACAAGCTAATAGGGGATAGATTGGACCTGAATTCTGTTGGTGTCTTTGCTAATGGTAGTTTATTGCTGGAAGAAACTATGAAGGTCAACAGAACTGGTTTAACAGGTCAAATGATGTTTAGTCCAGATGGTGAACTTATGAATCCTGCATATGAGATTATCAATGTAATTGGTACTGGTGTTAGGAGGATTGGGTTTTGGTCTAATTCTTCTGGTTTACACACTGGACTAGCACCTGATAAACATTCAAAGTCAAGTAAAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACTGCAACACCTCGCGGTTGGGTTTTCGCCAACGATGGAAGGCATTTGAAAATTGGGGTGCCTCTCAGGATCAGTTACCATGAATTCGTTTCAAGAATTGATGGATCTGAAATGTTTGGCGGTTATTGTATAGATGTGTTCACAGCTGCACTGGAATTATTGCCTTATCCAGTTCCATACAAGTTTGTCCCTTTCGGAGATGGTAAAACCAACCCACTAAACTCAGAACTTCTGCAAAAAATCACAATCGGTGAGTTTGATGCTGTGGTAGGGGACATTACAATTACCACAAACAGAACAAAGATAGTGGATTTCACACAACCATATATTGAGTCAGGGCTAGTTGTTGTGGCTCCTATTAGAAAGTCAAACTCAAATGCTTGGGCTTTCCTAAGACCATTTACTCCAATGATGTGGTTTGTCACTGGAATGTCTTTCTTTGTTGTGGGAGCAGTTGTGTGGATTTTAGAACGCCGAGTCAATGATGATTTTAGAGGTCCCCCTAGAAGACAGTTTGTCACCATTATATGGTTTAGTTTTTCAACCCTGTTCTTTGCACATAGAGAGAGAACTCTGAGCACCCTGGGTCGCTTAGTGCTGATAATATGGCTATTCGTAGTGCTGATACTGAACTCCAGCTACATAGCAAGCTTGACTTCCATTCTCACAGTGGAACAGCTCTCTTCTCCCGTGAAAGGAATTGAAAGCTTAGTTACCAGCAAAGATCTCATTGGCTATCTGCGAGGTTCATTTGCAGAGAACTACCTCACTGATGAACTCAACATTATGAAATCCAGGCTTGTTCCCCTGAATTCTCCTTTAGAATATGAGAAAGCCTTGAAGGATGGACCTGCCAATGGTGGTGTTGCAGCAATAATCGATGAACGTGCTTACATGGAGCTCTTTCTGTCAACCAGATGCGAATTTGGAATCGTTGGTCAAGAGTTCACCAAAATGGGTTGGGGTTTTGCTTTTCCGAGAGACTCTCCTTTGGCAATAGACATGTCAACAGCGATCTTGAAACTATCAGAGAATGGTGATCTTCAAAGAATACATGACAAGTGGCTTTCAAGAAGTGCTTGCAGTTCAGAAGGATCAAAGCAAGGCATAGATAGATTAGAGCTAAAGAGCTTCTGGGGTCTCTTCCTTCTCTGTGGCATTGCCTGTTTCATAGCTCTCCTTTGTTATGTCATTCGCATGGCCCACCGTTTCAGCCGCCACTCCGACTGTAACCTCGCCGGCTCGTCGCACTCGGCTCGAATCCGGTCATTTATTTCCTTTGTCAATGAAAAGGAAGATGATGGAAAGAATGGCACCAAGACAAAGAGAAGCAGGAAGGTAGCGCATGAAGATGGGTCAATAGATGGCTCCAATATTGACAGTGTTCATTATGAAAATGATTCTTCTGAGTGTTAA 2820 0.4181 MRFVLFVFVFAEQHIIMQKIWLLVLVMIFYCVIYSNGLSGVPTRPRSVNIGAILSFNSTVGKVAKVAIDAAKDDINSNPSVLNGTKLNISFQDTKFSTGFLGIIDSLLLMENDTVAIIGPQYSVMAHVISHIANELQVPLLSFAATDPTLTSLQFPYFVRTTQSDHFQMAAVADIVDYYQWRDVIAIYIDDDHGRNGIVSLEDKLAEKRCKISYKAPLRPNKINREEINSALVKVIIRESRVIVLHIYPSFGLDVLSVAGSLGMLGSGYVWLATDWLSTVLDTDPSSSAPHMNDLQGVITLRMYTPESGMKKNFTSRWSNLIKEKAPDQSPFMWNTHGLYAYDSVWVLAYALDSFFNSGGTLSFSNDSSLNKLIGDRLDLNSVGVFANGSLLLEETMKVNRTGLTGQMMFSPDGELMNPAYEIINVIGTGVRRIGFWSNSSGLHTGLAPDKHSKSSKGLYGVIWPGQTTATPRGWVFANDGRHLKIGVPLRISYHEFVSRIDGSEMFGGYCIDVFTAALELLPYPVPYKFVPFGDGKTNPLNSELLQKITIGEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKSNSNAWAFLRPFTPMMWFVTGMSFFVVGAVVWILERRVNDDFRGPPRRQFVTIIWFSFSTLFFAHRERTLSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVTSKDLIGYLRGSFAENYLTDELNIMKSRLVPLNSPLEYEKALKDGPANGGVAAIIDERAYMELFLSTRCEFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLSRSACSSEGSKQGIDRLELKSFWGLFLLCGIACFIALLCYVIRMAHRFSRHSDCNLAGSSHSARIRSFISFVNEKEDDGKNGTKTKRSRKVAHEDGSIDGSNIDSVHYENDSSEC 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1203 939 FunFam Glutamate receptor 721 828 - -
Lele54g1203 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 61 77 - -
Lele54g1203 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 341 353 - -
Lele54g1203 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 122 150 - -
Lele54g1203 939 CDD PBP1_GABAb_receptor_plant 49 443 IPR044440 -
Lele54g1203 939 Gene3D - 595 731 - -
Lele54g1203 939 Gene3D - 754 831 - -
Lele54g1203 939 Gene3D - 479 594 - -
Lele54g1203 939 Gene3D - 164 443 - -
Lele54g1203 939 MobiDBLite consensus disorder prediction 900 921 - -
Lele54g1203 939 SUPERFAMILY Periplasmic binding protein-like II 459 826 - -
Lele54g1203 939 CDD GluR_Plant 484 824 - -
Lele54g1203 939 PIRSF IGluLR_plant 14 938 IPR017103 -
Lele54g1203 939 FunFam Glutamate receptor 164 324 - -
Lele54g1203 939 Pfam Ligand-gated ion channel 826 857 IPR001320 GO:0015276|GO:0016020
Lele54g1203 939 FunFam Glutamate receptor 479 595 - -
Lele54g1203 939 Pfam Bacterial extracellular solute-binding proteins, family 3 509 825 IPR001638 -
Lele54g1203 939 Gene3D - 66 418 - -
Lele54g1203 939 FunFam Glutamate receptor 595 725 - -
Lele54g1203 939 SUPERFAMILY Periplasmic binding protein-like I 44 475 IPR028082 -
Lele54g1203 939 MobiDBLite consensus disorder prediction 900 939 - -
Lele54g1203 939 SMART GluR_14 485 826 IPR001320 GO:0015276|GO:0016020
Lele54g1203 939 Pfam Receptor family ligand binding region 66 428 IPR001828 -
Lele54g1203 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 48 897 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1203 Lele-ChrLele54 17618052 17622409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1203 21 926 Ion Channels AT3G51480 56.955 0.0 1066