Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1202 ATGAGGAGTCCGCATTACAGCCCCAAAGATGGCCACGGAATAGTAGCTTTCGGCTATACACAGGAAGAAGAAGCAGAAAAGGGCAAGAATATATTCAGCCGGTGGCCTGTGCTTAAGAAACTTCCAACCATGATTGACGTTTGGCTTGTGATGTTAATGGTCCTCTCTAATGGGCTTTCTTCATCTGGGGCTGGCATGAATGATTCAGCAATACCTGAATTTGTAAATATTGGAGCACTCTTCTCTTTCAATACCACTGCTGGTAGAATTGTAAGAGTAGCTATTGAAACAGCAGTTGCAGATATAAATTCCGATCCTTCGATTCTTGGAAAAACTAAGCTGAGGGTCTCAATGCAAGAGGACTCCAAATACAGAGGTTTTCTGAGCATTTCTGAGGTCTTGCAGCTCATGGCTAGACACACTGTGGCTATAATTGGTCCCCAGACATCTATAACAGCTCATGTCATATCTCATGTTGCAAACGAGCTCCAAGTTCCACTTCTATCATTTTCAGCCACAGACCCTACACTTTCTTCACTTCAATTCCCATTCTTTGTTAGAACTGCTCCTAGTGATATTTATCAGATGACTGCAATTGCCGAGCTTGTAGACTTCTACGGGTGGAGAGAAGTTATCGCCATTTATGCCGACGATGACCATGGGAGGAACGGGATTGGTTCTTTAGGGGATAAGCTTGCAGAGAGACGTTGTAAAATCTCATATAAAGCACCAATAAGCCCTGAAGCAACTAGGGAGGAGATTACTGATGTGCTTGTTCAGGTGGCTCTTGCTGAATCTCGGATTATAATTCTTCACACTTATGCTGCTTGGGGCCCCCAGGTGTTTGATGTGGCGAAACATCTTGGGATGATGGGAACTGGGTATGTCTGGATAGCCTCCAACTTTCTCACTGCTCTTCTGGACTCTGAGAGTCCCATCCATTCAGATCAAATAGATGAAATCCAAGGAGTTCTTACACTGCGTTTGCACACACCCGATTCAGAGCTCAAGAGAAGGTTTTTTTCTAGGTGGAAAAACCTGACTGGAGGAATGACTGCTGATGGTCCACTTGGATTGAACACTTTTGGTCTCTATGCATATGATACTGTTTATATGCTTGCTCGTGCACTTGATACATTTTTCAAACAAAGGAACCGAATCACATTCTCATATGATTCAAAGTTATCTCAACTACGTGGAGACAGCTTGCATCTTGATGCAGTGAACATCTTTGATCAAGGAAATCTGTTGCGTACAAGTATTTATGGGGTTAACATGACTGGGGTAACAGGTCATATTAAGTATGCAGCTGATGGGAATCCTATGAATCCATCATATGAAATCTTCAATGTGATAGGAACAGGTGCAAGGAGGATTGGTTATTGGTCTAATCACTCTGGATTATCTGTTGATCCTCCAGAAGTACTTTATTCAAAACCAGCCAATCGTTCCAGTGCGAATCGAAAGCTACTTCCTGTGATCTGGCCTGGAGAAACAACACAGAAGCCCCGTGGTTGGGTTTTTCCGAACAATGGAAGGAACTTAAGAGTTGGAGTACCGAGAAGGGTTAGTTACAGACCATTTGTCTCACAAATACAAGGCACTGACATGTTCAAGGGATTCTGCATTGATGTATTCCTTGCTGCAGTGAACTTACTGCCCTATGCGGTTCCCTATAAGTTTATTCCATTTGGGGATGGTCTCAGCAATCCTAGTAACACTGAGCTTGTTCGTCTGATCACGGCTGGCGTCTTTGATGCTGCAGTGGGTGACATTACGATTACAACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCATATATCGAGTCTGGTCTAGTGGTCGTAGCACCTGTTAAGAAGGTAGAATCCAATGCATGGGCTTTTATGAGGCCATTTACGCCAATGATGTGGTGTGTCACAGCAATCTTCTTCTTAGTCGTGGGAGCTGTTGTTTGGATCTTGGAGCATAGGCTGAATGATGATTTTCGAGGACCTCCCAAAAAGCAAGTTGTGACAATTTTGTGGTTTAGCTTTTCAACTATGTTCTTCTCTCACAGGGAAAATACAGTGAGCACACTTGGTCGCTTCTTGCTACTTATATGGCTATTTGTGGTTCTTATAATTAATTCAAGTTACACAGCAAGTCTGACCTCAATCCTCACAGTACAAAAGCTTTCTTCGCCCATTAAAGGCATTGAAAGTTTAGTAAACAGCAAAGAACCTATCGGCTACTTGCAGGGTTCTTTCACTCGAGATTACTTAGTTGAGGAAGTCGGCATTCATGAATCAAGACTTGTTCCTCTGAAAACAGGAGATGAGACTGCTAAAGCATTAAAAGCTGGCCCCAAAAAAGGCGGTGTCGCTGCATATGTTGATGAGCGTGCTTACATTGAGCTCTTACTTTCAAGCCGGTGTGATTTTACTATTGTAGGTCAAGAGTTCACCAGAAATGGTTGGGGATTTGCCTTTCCTAGAGACTCTCCTTTAGCAGTTGACCTTTCAACAGCGATTTTGGAACTGGCAGAGAATGGAGATCTTCAAAGGATCCATGACAAATGGCTTCTGAACAGAGCGTGCCTAGCACAAGGTGCAAAGCTTGATGTGGACAGACTTGATTTTAAATCCTTCTGGGGTCTCTATTTGGTATGTGGACTAGCTTGCTTGCTGGCTCTCTTCATTTATCTCATACAGATGATGACACAGTACACCAAACACTATTCCGACGAAAGCGAGTCCTCCGGCCAGAGCTCGATGTCCAAGCGCCTGCGGACTTTCCTGACATTCGTGGACGAGAAAGAGGATGAAGTTAAGCAAAGGTCCAGTAGAAGGCAAGTGGAAAGGATCTCATACAGAAGCAGTAGTTCTGTGGGTGGAACATTGTCATCTTCTACCATATGCTCCTCCAACAAAGATTGTGCTCAATCCTCTTCAAACAAAATTGATTGTGCTTATGACGCTTGA 2964 0.4349 MRSPHYSPKDGHGIVAFGYTQEEEAEKGKNIFSRWPVLKKLPTMIDVWLVMLMVLSNGLSSSGAGMNDSAIPEFVNIGALFSFNTTAGRIVRVAIETAVADINSDPSILGKTKLRVSMQEDSKYRGFLSISEVLQLMARHTVAIIGPQTSITAHVISHVANELQVPLLSFSATDPTLSSLQFPFFVRTAPSDIYQMTAIAELVDFYGWREVIAIYADDDHGRNGIGSLGDKLAERRCKISYKAPISPEATREEITDVLVQVALAESRIIILHTYAAWGPQVFDVAKHLGMMGTGYVWIASNFLTALLDSESPIHSDQIDEIQGVLTLRLHTPDSELKRRFFSRWKNLTGGMTADGPLGLNTFGLYAYDTVYMLARALDTFFKQRNRITFSYDSKLSQLRGDSLHLDAVNIFDQGNLLRTSIYGVNMTGVTGHIKYAADGNPMNPSYEIFNVIGTGARRIGYWSNHSGLSVDPPEVLYSKPANRSSANRKLLPVIWPGETTQKPRGWVFPNNGRNLRVGVPRRVSYRPFVSQIQGTDMFKGFCIDVFLAAVNLLPYAVPYKFIPFGDGLSNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVAPVKKVESNAWAFMRPFTPMMWCVTAIFFLVVGAVVWILEHRLNDDFRGPPKKQVVTILWFSFSTMFFSHRENTVSTLGRFLLLIWLFVVLIINSSYTASLTSILTVQKLSSPIKGIESLVNSKEPIGYLQGSFTRDYLVEEVGIHESRLVPLKTGDETAKALKAGPKKGGVAAYVDERAYIELLLSSRCDFTIVGQEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLNRACLAQGAKLDVDRLDFKSFWGLYLVCGLACLLALFIYLIQMMTQYTKHYSDESESSGQSSMSKRLRTFLTFVDEKEDEVKQRSSRRQVERISYRSSSSVGGTLSSSTICSSNKDCAQSSSNKIDCAYDA 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1202 987 Gene3D - 626 752 - -
Lele54g1202 987 CDD GluR_Plant 515 855 - -
Lele54g1202 987 Gene3D - 93 443 - -
Lele54g1202 987 FunFam Glutamate receptor 191 342 - -
Lele54g1202 987 FunFam Glutamate receptor 510 626 - -
Lele54g1202 987 PIRSF IGluLR_plant 42 984 IPR017103 -
Lele54g1202 987 Gene3D - 513 625 - -
Lele54g1202 987 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 75 921 - -
Lele54g1202 987 CDD PBP1_GABAb_receptor_plant 76 472 IPR044440 -
Lele54g1202 987 Gene3D - 191 468 - -
Lele54g1202 987 Pfam Bacterial extracellular solute-binding proteins, family 3 517 855 IPR001638 -
Lele54g1202 987 FunFam Glutamate receptor 626 756 - -
Lele54g1202 987 SUPERFAMILY Periplasmic binding protein-like II 490 857 - -
Lele54g1202 987 FunFam Glutamate receptor 752 859 - -
Lele54g1202 987 Pfam Receptor family ligand binding region 93 453 IPR001828 -
Lele54g1202 987 SUPERFAMILY Periplasmic binding protein-like I 70 507 IPR028082 -
Lele54g1202 987 Gene3D - 796 862 - -
Lele54g1202 987 SMART GluR_14 516 857 IPR001320 GO:0015276|GO:0016020
Lele54g1202 987 Pfam Ligand-gated ion channel 856 888 IPR001320 GO:0015276|GO:0016020
Lele54g1202 987 MobiDBLite consensus disorder prediction 948 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1202 Lele-ChrLele54 17611878 17616434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1202 48 955 Ion Channels AT3G51480 59.276 0.0 1150