Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1197 ATGGCGAGGATTAAACCGCAAGCTCTACTGCAGCAAAGCAAGAGGAAGAAGGGGCCTTCTCGAATAAGTGCCACAACTGTTATATTTTACAGCATGATTCTTGTCTTGGTTGTGTTTTTCCTGTTCAGTGCGTACAAACATTGGTCCCACAGGTCAAGATTTGCAGCAGAGAATCAGATTACAATCTCTCAGGCTGAAAATTCTTTTGGAGACTCAAAAAAGTCTGAGGTGCCTGGATATGCTGTTTTAAATACCTCTAAAGGCTCCATTGTAATTGAACTTTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTTATTGACCTATGTCAAAAAGGGCATTTCAAGGGAATGCTTTTCCACCATGTAATTAAGCACTATGTGATTCAGGCAGGGGAGAACCAAGGGACCGGGGCTACAGAAGATTGGAACCTGAGAGGAAAACATTATTCAAGTATGAAGCATGAGGCATTCATGCTTGGAACTTCCAAGGGCAAACACTTGAACAAAAAATTTGATCTTTTCATTACAACTGCACCAATACCAGATCTAAATGAGAAGCTTATTATTTTTGGCAGAGTCATCAAGGGAGAGGATGTTGTTCAGGAAATTGAGGAAGTGGATACAGATGAACACTTCCAACCTAAAATTTCTATTGGAATACTTGATGTGACGCTCAAACAGAAGATCTGA 693 0.4026 MARIKPQALLQQSKRKKGPSRISATTVIFYSMILVLVVFFLFSAYKHWSHRSRFAAENQITISQAENSFGDSKKSEVPGYAVLNTSKGSIVIELYKESAPEVVDEFIDLCQKGHFKGMLFHHVIKHYVIQAGENQGTGATEDWNLRGKHYSSMKHEAFMLGTSKGKHLNKKFDLFITTAPIPDLNEKLIIFGRVIKGEDVVQEIEEVDTDEHFQPKISIGILDVTLKQKI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1197 230 FunFam Peptidyl-prolyl cis-trans isomerase 67 230 - -
Lele54g1197 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Lele54g1197 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Lele54g1197 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
Lele54g1197 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Lele54g1197 230 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 224 IPR002130 GO:0000413|GO:0003755
Lele54g1197 230 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 88 226 IPR002130 GO:0000413|GO:0003755
Lele54g1197 230 Gene3D - 65 230 IPR029000 -
Lele54g1197 230 CDD cyclophilin 82 223 - -
Lele54g1197 230 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 230 - -
Lele54g1197 230 SUPERFAMILY Cyclophilin-like 79 226 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1197 Lele-ChrLele54 17574273 17578095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1197 79 226 U-box Gene Family AT5G67530 28.387 4.39e-16 75.1