Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1193 ATGGCATTGACTGCACCAAATCCACTTTTGAGGGTGGAGGAGATACAAGGGAGAGGAAGGGGAATAGTTGCATCTCAACCTCTAAAAGCTGGCCAAGTTGTTCTCAGAGATTCTCCTATCGTGCTATATTCTGCTTTGCCTTTGATCCCACAGTCATCATCCAACTCCTCTTCTCCAGGCTTCTGTTACCACTGTTTCAGAACCCTACCAGGTCCATCTTCAACGGGCAGTCCTTCATCTTCCTCAGTTTTGTGCCCTTCTTGTGGCCACCAACGTTTCTGTAGCCCAAAATGTCTATCAGTTGCCCAAAATTCATCCCACACTTCTTGGGTATGTCAAGCATTATCTCATCTCCGAGGCAATTCTGTGCTGCTTGAACAACCCCTTGAATGTCAAGCCCAAGTGCATTTTCTCTTTGCTGCCTACAATCTTGCCAATGTCTCCCCATCAGACTTTCAAACTTTGCTTTCTCTTCATGGTTCTCCTGATGAAACTACAATTGCTGCAGCTCAGTGCCTGCACTCCCTTATTACGTCCCCCTCTCCATTTGCTTCAACTATTAATCAGAATGGATTGTCCTTGGAACTCACTGCTGCCCTGTTGGCCAAGGATAAGTTCAATGCATTTGGCTTGATGCAACCCTTCACTGAAGATAATGACCAGAGATCTGTCAGAGCTTATGGCATATACCCTTATGCCTCCTTCTTTAACCATGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGATACTAGTGCAACAGATGACAACCATAACACCGACATTATCATTAGGATGATCCATGATGTTCCTGAAGGTAGGGAGGTCTGTTTGAGCTATTTCCCGGTGAATGAAAATTATTCTAGTAGGCAGAAAAGACTGGCGGAAGACTATGGCTTCACCTGTAAGTGTGATCGATGTAATATCGAAGCAAATTGGTCAGATAACGATAGTGTTGAGGATGATGCTGAGGATATTGAAGAGGCAATGGATGAGGACGAATGTGAAAATATGGCAGCTTCTGACACTGAAAGTAATCCACAAGGAGATAACAGTGATTTTCCCCATGCATATTTCTTCTTGAAATTCATGTGTGATAGAAAGAATTGCTGGGGTACTTTAGCTCCTTTACCCCCACAGGGTAATACTCCATCCAATGTTATGGAATGTAATGTCTGTGGCAACTTGAAGTGCGACAATGTCCTTGATGGTGATGGAGGACAAGGTGGAGTTTCCAAGGAGGACTGA 1251 0.4428 MALTAPNPLLRVEEIQGRGRGIVASQPLKAGQVVLRDSPIVLYSALPLIPQSSSNSSSPGFCYHCFRTLPGPSSTGSPSSSSVLCPSCGHQRFCSPKCLSVAQNSSHTSWVCQALSHLRGNSVLLEQPLECQAQVHFLFAAYNLANVSPSDFQTLLSLHGSPDETTIAAAQCLHSLITSPSPFASTINQNGLSLELTAALLAKDKFNAFGLMQPFTEDNDQRSVRAYGIYPYASFFNHDCLPNACRFDYVDTSATDDNHNTDIIIRMIHDVPEGREVCLSYFPVNENYSSRQKRLAEDYGFTCKCDRCNIEANWSDNDSVEDDAEDIEEAMDEDECENMAASDTESNPQGDNSDFPHAYFFLKFMCDRKNCWGTLAPLPPQGNTPSNVMECNVCGNLKCDNVLDGDGGQGGVSKED 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1193 416 SUPERFAMILY SET domain 7 309 IPR046341 -
Lele54g1193 416 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 403 IPR044238 -
Lele54g1193 416 SMART set_7 8 288 IPR001214 GO:0005515
Lele54g1193 416 Gene3D - 126 208 - -
Lele54g1193 416 CDD SET_SMYD 206 308 - -
Lele54g1193 416 Coils Coil 317 337 - -
Lele54g1193 416 Gene3D SET domain 21 308 IPR046341 -
Lele54g1193 416 ProSiteProfiles SET domain profile. 8 282 IPR001214 GO:0005515
Lele54g1193 416 MobiDBLite consensus disorder prediction 331 352 - -
Lele54g1193 416 Gene3D - 61 121 - -
Lele54g1193 416 Pfam SET domain 19 281 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1193 Lele-ChrLele54 17550766 17552016 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele54g1193 SET 1.7e-11 No_clan