Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1189 ATGCAGAGAATACAGCTAGAAAAGGGGGTGGGGTGGGGTGGGGGGAGGATAGAGATCAGTTGGCAAAATGACGTCGTTTCGCAATATGAACATCTAGCCGTGGGTGCAATCTATGGTCTGCTTGCGAGGGCTCTTTCTCTCATATTCTCAGACATGGCGAGATCTGTGCCTCTTTTTTCCACCATTTTCGTCCTCCTTCTCCTGTTGGTCGCCACTGAGATGGGGCCGATGATGGTGGCAGAAGCAAGGACTTGCGAGTCTCAGAGCCACCGCTTCAAGGGGCCCTGTGCGAGCAAATCTAACTGCGCCTCCGTTTGCCAGACCGAAGGCTTCCCCGACGGTGACTGCCGTGGCCTCCGTCGCCGTTGCTTCTGCAGCAAACCATGTTAG 390 0.5513 MQRIQLEKGVGWGGGRIEISWQNDVVSQYEHLAVGAIYGLLARALSLIFSDMARSVPLFSTIFVLLLLLVATEMGPMMVAEARTCESQSHRFKGPCASKSNCASVCQTEGFPDGDCRGLRRRCFCSKPC 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1189 129 CDD Knot1 94 125 IPR003614 GO:0006952
Lele54g1189 129 SUPERFAMILY Scorpion toxin-like 83 129 IPR036574 -
Lele54g1189 129 SMART gth_4 84 129 IPR003614 GO:0006952
Lele54g1189 129 Pfam Gamma-thionin family 83 129 - -
Lele54g1189 129 PRINTS Purothionin signature 114 128 IPR008176 GO:0006952
Lele54g1189 129 PRINTS Purothionin signature 84 99 IPR008176 GO:0006952
Lele54g1189 129 Gene3D - 83 129 IPR036574 -
Lele54g1189 129 PANTHER DEFENSIN-LIKE PROTEIN 1 55 126 - -
Lele54g1189 129 ProSitePatterns Gamma-thionins family signature. 83 106 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1189 Lele-ChrLele54 17532985 17535030 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1189 52 129 Plant Defensins Gene Families AT2G02100 60.256 1.30e-30 103