Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1169 ATGTCTGCTCCTGGATATGCACGAAGAAGAAGCATTTCCTTCCTTTATCTTTTTCTTGCTGTTTCCGTTGCACAGATTACAGTGTCCTTCTCTGCAAAGGTTTATGTAGTCTACATGGGAAGCAAAAATGGCGAAGACCATGACGAAATTATGAAGCACCACCATCAAATTCTTGCGTCTGTTCACAGTGGAAGCATTGAGGAAGCCGAAGCTTCGCATGTCTATAGCTACAAACATGGTTTCAGAGGATTTGCCGCGAAGCTGACTGATGAGCAGGCTTCTCAGATTTCAAAAATGCCCGGAGTGGTTTCTGTGTTCCCCAATTCTAGAAGACGTCTGCATACAACTCATTCATGGGACTTTATGGGCCTTCTGGATGATCAAACTATGGAGATTCTTGGGTTCTCCCCCAGAAACCAAGCAAACATCATCGTTGGTTTCATTGACACTGGAATTTGGCCTGAATCTCCAAGTTTCAGTGATGTTGACATGCCTCCGGTGCCACCAGGATGGAAAGGAAAATGTCAATCAGGAGAAGCATTCAATGCTTCCTCTTGCAACAGGAAAGTCATTGGAGCTAGATACTACAATCGTGGGTATGAAGCAGAAGAAGGGCCTGACTCAGACATAAAAGTCTCCTTCAGATCTCCAAGAGATAGCTCTGGCCATGGCAGCCACACAGCTTCAATAGCCGCTGGGCGGTATGTGCCCAACATGAACTATATGGGATTGGCAGGTGGAGGAGCTAGGGGAGGAGCGCCATTGGCTAGGATTGCTGTGTACAAAACTTGTTGGGACTCAGGCTGCTATGATGTGGATTTGCTGGCTGCTTTTGATGATGCCATCAGAGATGGGGTTCACATATTGTCTGTGTCTTTGGGTCCTGATTCTCCTCAAGCAGACTACTTTAATGATGCCATATCTGTGGGGTCGTATCATGCAGCCAATCGTGGGGTTCTGGTGGTTGCATCGGCTGGGAATGAAGGGTATCCTGGTTCTGTTACCAACCTTGCCCCATGGATGATCACTGTTGCTGCTAGCTCCACTGATAGGGATTTCATCTCTGATGTCACATTGGGAAATGGTGTCAATATCACGGGTGAAAGTCTGAGTCTCTTGGAAATGAATGCCTTTACAAGGATAATTTCAGCTTCTGAAGCTTCTGCTGGATATTTCACTTCTTATCAATCCAGCTACTGTATAGAAAGTTCCCTCAATAAAACCAAGACCCAAGGGAAAGTTCTGGTGTGCCAACATGCAGAGAGGTCGACCGAGTCAAAGGTCGCGAAAAGTGCTTTAGTTAAAGAAGCAGGCGGAGTTGGAATGATACTTATAGATGAAACAGGTCAAGATATTGCCATCCCGTTTGTGATACCATCAGCCATTGTTGGAAGGAGAACAGGCCACCATATTCTCTCGTATATCAACAATACACGTAAGGGTAAGGCTATGTCAAGGATTTCCAGAGCAAAGACAGTATTAGGAGCAAAGCCTGCACCACGTGTGGCAGCATTTTCTTCCAAAGGCCCCAACAGCTTAACCCCAGAAATTCTGAAGCCTGACGTCACAGCCCCAGGATTGAATATCCTTGCGGCTTGGTCTCCAGCAGCCAAAAACATGGAGTTTAACATTCTCTCAGGAACTTCCATGGCTTGTCCTCATATAACTGGAATTGCAACCTTAATCAAAGCTGTTCATCCTTCATGGTCTCCGTCTGCTATCAAGTCTGCTATCATGACAACTGCTACAATTCTGGATAAGCACCATGGATTCATCAGAGCGGATCCTGAACAAAGAAGCGCCAACGCATTTGATTATGGATCAGGCTTTGTGAACCCTGCAAGGGTTCTTGACCCTGGTCTCATCTATGATATAGAAGCAGAAGATTATCTAACATTCCTCTGCTCACTTGGTTACAATGAGAGGTCACTCCATCTTGTTACTAGAAACAACAAAACATGTGATAGGGCATTCAAATCTGCATCTGAGCTCAACTATCCATCCATCACAGTACCAAATCTCAAAGACAACTTCGCAGTGACTAGAACTGTGACTAATGTTGAAAAATCAACAAGTATTTACAAAGCTGTAGTGTCTCCTCCTGCAGGAGTTAATGTCACTGTTGTGCCAAACAGGTTAATCTTCACAAGGATTGGGCAGAAAATCAACTTCACTGTGAATTTCAAAGTTGCTTCTCCCTCAAAGGGCTATACATTTGGTTTCCTGCTATGGAGGAACAGAAGATTGCACGTCTACAGTCCTTTAGTTGTCAGGGTTTCACCTTCAAAACATGGGTTGTTCAGATAA 2307 0.4486 MSAPGYARRRSISFLYLFLAVSVAQITVSFSAKVYVVYMGSKNGEDHDEIMKHHHQILASVHSGSIEEAEASHVYSYKHGFRGFAAKLTDEQASQISKMPGVVSVFPNSRRRLHTTHSWDFMGLLDDQTMEILGFSPRNQANIIVGFIDTGIWPESPSFSDVDMPPVPPGWKGKCQSGEAFNASSCNRKVIGARYYNRGYEAEEGPDSDIKVSFRSPRDSSGHGSHTASIAAGRYVPNMNYMGLAGGGARGGAPLARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSVSLGPDSPQADYFNDAISVGSYHAANRGVLVVASAGNEGYPGSVTNLAPWMITVAASSTDRDFISDVTLGNGVNITGESLSLLEMNAFTRIISASEASAGYFTSYQSSYCIESSLNKTKTQGKVLVCQHAERSTESKVAKSALVKEAGGVGMILIDETGQDIAIPFVIPSAIVGRRTGHHILSYINNTRKGKAMSRISRAKTVLGAKPAPRVAAFSSKGPNSLTPEILKPDVTAPGLNILAAWSPAAKNMEFNILSGTSMACPHITGIATLIKAVHPSWSPSAIKSAIMTTATILDKHHGFIRADPEQRSANAFDYGSGFVNPARVLDPGLIYDIEAEDYLTFLCSLGYNERSLHLVTRNNKTCDRAFKSASELNYPSITVPNLKDNFAVTRTVTNVEKSTSIYKAVVSPPAGVNVTVVPNRLIFTRIGQKINFTVNFKVASPSKGYTFGFLLWRNRRLHVYSPLVVRVSPSKHGLFR 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1169 768 FunFam Subtilisin-like protease SBT1.5 142 361 - -
Lele54g1169 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 114 IPR037045 -
Lele54g1169 768 FunFam Subtilisin-like protease SBT1.5 634 760 - -
Lele54g1169 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 757 IPR045051 -
Lele54g1169 768 SUPERFAMILY Subtilisin-like 113 621 IPR036852 GO:0004252|GO:0006508
Lele54g1169 768 CDD Peptidases_S8_3 113 583 IPR034197 -
Lele54g1169 768 Pfam Peptidase inhibitor I9 34 114 IPR010259 -
Lele54g1169 768 Gene3D - 634 760 - -
Lele54g1169 768 ProSiteProfiles Serine proteases, subtilase domain profile. 118 617 - -
Lele54g1169 768 Gene3D Peptidase S8/S53 domain 142 630 IPR036852 GO:0004252|GO:0006508
Lele54g1169 768 Pfam Fibronectin type-III domain 663 757 IPR041469 -
Lele54g1169 768 CDD PA_subtilisin_like 356 483 - -
Lele54g1169 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Lele54g1169 768 Gene3D - 350 494 - -
Lele54g1169 768 Pfam PA domain 389 470 IPR003137 -
Lele54g1169 768 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Lele54g1169 768 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Lele54g1169 768 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Lele54g1169 768 FunFam Subtilisin-like protease SBT5.3 23 114 - -
Lele54g1169 768 Pfam Subtilase family 142 587 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1169 Lele-ChrLele54 17384965 17389556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1169 21 759 Subtilisin-like Serine Gene Family AT2G04160 43.823 0.0 580