Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1168 ATGCTTTCTCTCCAATGCAGCAGCAAGCGTCATCATCACTACTATCATCGCCGCCACAAGTCTGACATGAATCCATGCCCATGCATCTCCCTCTCCTCCTCCGCCGCCGCCGCCGCCGTCATATGTATTCTGCAACTCCTTTTCCCGGCGGCGATGTCCCAACCCCAGAACATGAGAACAGCCCCATACGTCTTCGGCCCCTTCGACGTCACTAACTACACAACCTTGAAAGTCATTCAACCGGCGTCGATCAACTTCGGAGCTCTCCAAATAACTCCGGACACCGCCGGCAACGTCCCCCTCACAAACACCTCCGGTCGAATCCTCTTCCGGGAACCCTTCACACTCTGGGAAGACACCGGAAAGGTTGCTTCCTTCAACACTTCATTCCTCATCAACGTCTATCGCGTCAACAACGCCACTCCCGGCGAAGGCGTCGCCTTCGTCATTGCCCCAAACCTCGACCTCCCCCGAAACAGCCATGGTCAATACCTTGGCCTCACCAACTCCACCACCGACGGCAGCCCCGACAACCACATCGTCGCAGTCGAACTAGATACCGTCAAGCAAGACTTCGACCCCGACGACAACCACATCGGACTCAACATCAACAGCGTCAAATCAAAAACCAGCGTCTCCCTGTCTCAATTCGGAATCCAGATCGCTCCAGACAGTGCCAAATACTATGTAATCTGGATAGACTACAACGGTTCAAGCAAGAAAATTAACATATTCACCAAAGAACAACCCGACAGAAACGCACCTATAGTATCAAAACCAGAAGAACCAGTGTTAACCTCAGATCTAGATCTCAAAACCATCGTGAAACAGAGCTCTTACTTCGGGTTCTCTGGTTCCACCGGAATAACCTACCAGTTAAACTGTGTTCTGAGATGGAACATGACGGTGGAGGTTCTTACAGAAAACAAGAATAAGTCGCGATCTTTGAAGATGGGTTTTGGTATTGGGGTGCCATTGATGGCTTTGATTCTTGTGGGGATTGTTGGGTCAGTGTATTATGTTTATAGGAAGAAGAGAAGAAGAAGGTTAGACGATGAACAGATACTGGGGACGTTGAAGAGCTTGCCTGGAACGCCGAGAGAGTACTCGTTCAAGGAATTGAAGAAGGCGACGAACAATTTCAATGAGAAGAATAAGCTCGGAGAAGGAGGGTATGGGATGGTGTACAGAGGGATTTTGCAGAAAGAGAATAATTTGGAAGTTGCAGTGAAGAAATTCTGCAGAGATAAGATGAAATGCAAAGATGATTTCTTAGCTGAACTCACCATTATCAACCGTCTTCGTCATAAGCATCTTGTGAGGTTACTAGGTTGGTGCCACAAGAATGGGGTGTTAGTGTTGGTGTATGAGTTCATGCCGAATGGCAGCTTAGACAATCACCTTTTCTTTGAGGAAGGAAAACCCACAACATCAAGCCCTCTGAGTTGGAACCTACGTTACAAAATCATCTCCGGTGTTGCTTCAGCGCTTAACTACCTTCACAACGAGTACGACCAGAAAGTAGTCCACAGAGATCTCAAAGCGAGCAACATCATGTTAGACTCCGACTTCAACGCTCGCCTAGGCGACTTTGGCTTGGCTCGAGCCATTGAGCACGAGAAAACCTCGTACGCCGAGGTCGAAGGAATCCACGGCACGATGGGCTACATCGCGCCCGAGTGCTTCCACACAGGGAAGGCGACACGACCATCAGATGTATTCAGTTTTGGAGCGGTTCTTCTGGAAGTGGTGTGCGGCGAGAGGCCGTGGACGAATAGGGAAGGGTTTCAGCTGTTGGTGGATTGGGTTTGGTATTTGTATGGTGAAGGAAGGATTCTCGAGGCAGTGGATAAAAGGCTTGGGAATGAGTATGAGGTTGAAGAAGCAAAGAAAATATTGAAATTAGGGTTGGCATGTTCTCATCCAATTGCAGGTGAGAGGCCAAAGATGCAAAGCATTGTGCAGATTATAAGCGGGGCCGTGCCAGAGCCTTATGTGCCTGCAAGCAAGCCTGCATTTATTTGGCCAGCTGTGGATTTTGGAAGCTTTATTAGTGATCTCACAACACCATCTTCAACCACTGTGAACACACCTCTTCATACAGATTCAGATCCTCTACATTCAAATTCATCTAAGTGA 2139 0.4853 MLSLQCSSKRHHHYYHRRHKSDMNPCPCISLSSSAAAAAVICILQLLFPAAMSQPQNMRTAPYVFGPFDVTNYTTLKVIQPASINFGALQITPDTAGNVPLTNTSGRILFREPFTLWEDTGKVASFNTSFLINVYRVNNATPGEGVAFVIAPNLDLPRNSHGQYLGLTNSTTDGSPDNHIVAVELDTVKQDFDPDDNHIGLNINSVKSKTSVSLSQFGIQIAPDSAKYYVIWIDYNGSSKKINIFTKEQPDRNAPIVSKPEEPVLTSDLDLKTIVKQSSYFGFSGSTGITYQLNCVLRWNMTVEVLTENKNKSRSLKMGFGIGVPLMALILVGIVGSVYYVYRKKRRRRLDDEQILGTLKSLPGTPREYSFKELKKATNNFNEKNKLGEGGYGMVYRGILQKENNLEVAVKKFCRDKMKCKDDFLAELTIINRLRHKHLVRLLGWCHKNGVLVLVYEFMPNGSLDNHLFFEEGKPTTSSPLSWNLRYKIISGVASALNYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARAIEHEKTSYAEVEGIHGTMGYIAPECFHTGKATRPSDVFSFGAVLLEVVCGERPWTNREGFQLLVDWVWYLYGEGRILEAVDKRLGNEYEVEEAKKILKLGLACSHPIAGERPKMQSIVQIISGAVPEPYVPASKPAFIWPAVDFGSFISDLTTPSSTTVNTPLHTDSDPLHSNSSK 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1168 712 SUPERFAMILY Protein kinase-like (PK-like) 362 656 IPR011009 -
Lele54g1168 712 Gene3D - 63 322 - -
Lele54g1168 712 MobiDBLite consensus disorder prediction 693 712 - -
Lele54g1168 712 Pfam Protein kinase domain 381 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g1168 712 SMART serkin_6 381 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g1168 712 Pfam Legume lectin domain 67 313 IPR001220 GO:0030246
Lele54g1168 712 ProSiteProfiles Protein kinase domain profile. 381 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g1168 712 Gene3D Phosphorylase Kinase; domain 1 366 458 - -
Lele54g1168 712 FunFam probable L-type lectin-domain containing receptor kinase S.5 459 662 - -
Lele54g1168 712 CDD STKc_IRAK 387 657 - -
Lele54g1168 712 ProSitePatterns Legume lectins beta-chain signature. 181 187 IPR019825 -
Lele54g1168 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Lele54g1168 712 PANTHER - 90 661 - -
Lele54g1168 712 CDD lectin_legume_LecRK_Arcelin_ConA 82 303 IPR001220 GO:0030246
Lele54g1168 712 SUPERFAMILY Concanavalin A-like lectins/glucanases 63 305 IPR013320 -
Lele54g1168 712 FunFam probable L-type lectin-domain containing receptor kinase S.5 366 458 - -
Lele54g1168 712 Gene3D Transferase(Phosphotransferase) domain 1 459 663 - -
Lele54g1168 712 ProSitePatterns Protein kinases ATP-binding region signature. 387 412 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1168 Lele-ChrLele54 17378481 17382724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1168 34 673 Receptor kinase-like Gene Family AT5G55830 37.172 2.44e-127 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele54g1168 Pkinase 1.4e-48 CL0016