Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1165 ATGGCGGCACTATGGGGATCGCTGGCCGCAGGGGGAGACATATCCAAGGCTCACATGGCTATGGTGATGGTTCAGCTTTTCAGTGGAGGGTACCATGTCATCACCAAAGTAGCCCTCAATGTTGGAATCAATCAATTGGTGTTTTGCGTTTTCCGCGATCTCCTTGCACTCGCTATTCTTGCTCCCATCGCTTACATCCGGGAAAAACGGACACGACCACCCATAACTAAGCGCCTCCTGATATCATTCTTCTTTCTTGGATTAACGGGGATATTCGGCAACCATCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCAGCTGCGATACAACCAGCCATTCCAGTGTTCACTTTTCTCTTGGCTGTAATGATGGGTACAGAAAGAGTGAATTTACTCAGATATGAAGGCCTGGCAAAAGTTGGAGGAACTCTTATCTGTGTTTGTGGGGCCATATTTATGGTTTTATTTCGTGGTCCAGCATTGATTGGATATGCAGATTCGGACATTTTAGCACATAGCGAAATAACTGCAAGAGGTCAACCTGAGCCATATGGATGGTTAATTGGCGGTTTAATGGATCTTGGTTTAGACCATTTTCATCTTGGGGTTCTGTGCTTGATCGGAAACTGCATGTGCATGGCTACTTGTCTGGCCATTCAGGCTCCACTATTGAAAAAGTATCCCGCAAACCTATCTGTCGCAGCATACTCTTACTTTTTTGGAGCTTTGCTGATGGTGATAACAGCATTCTTCATGACCAATGAGTCAACTGACTGGAGCTTGACACCATCTGAAACATTTGCTGTTATTTATGCTGGAACCATTGCATCTGCCGTTAACTACGGACTCTTGACATGGAGCAACAAGATTTTGGGTCCGGCTATGGTTGCCCTTTATAACCCACTTCAACCTGCAGCATCCACCCTTCTGTCACGAATTTTCCTTGGAAGTCCTATTTTCTTGGGAAGTGTGCTTGGGGGATCCTTGATCATTGCTGGTCTATATGCGGTCACATGGGCAACTTATAGAGAAAGACAAGCGGCACTTGGAGTTATTCCTCAGGGCTCCTCCTGGGTCAACGACCAAATTATTCACACAGATGGATTAGTGAGCAAGAGTTCATTTCAGTTAGGTCACATTTTTTCAGGGTCACCCAAGTCTTCTGATTAA 1182 0.4484 MAALWGSLAAGGDISKAHMAMVMVQLFSGGYHVITKVALNVGINQLVFCVFRDLLALAILAPIAYIREKRTRPPITKRLLISFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPAIPVFTFLLAVMMGTERVNLLRYEGLAKVGGTLICVCGAIFMVLFRGPALIGYADSDILAHSEITARGQPEPYGWLIGGLMDLGLDHFHLGVLCLIGNCMCMATCLAIQAPLLKKYPANLSVAAYSYFFGALLMVITAFFMTNESTDWSLTPSETFAVIYAGTIASAVNYGLLTWSNKILGPAMVALYNPLQPAASTLLSRIFLGSPIFLGSVLGGSLIIAGLYAVTWATYRERQAALGVIPQGSSWVNDQIIHTDGLVSKSSFQLGHIFSGSPKSSD 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1165 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 346 - -
Lele54g1165 393 Pfam EamA-like transporter family 205 342 IPR000620 GO:0016020
Lele54g1165 393 Pfam EamA-like transporter family 18 156 IPR000620 GO:0016020
Lele54g1165 393 PANTHER WAT1-RELATED PROTEIN 17 349 IPR030184 GO:0016020|GO:0022857
Lele54g1165 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1165 Lele-ChrLele54 17348834 17352535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1165 16 276 Nodulin-like Gene Family AT3G45870 71.264 9.60e-126 362