Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1155 ATGCGGCACTCAGGCATCAATGCTATGAAAGCCATTGCCATTCTCTCTCTCTCAACCCCCCGTCCCCCGTTTTCTTCTCTCCTTCCCCTATTCTATTTCAAAGCAGGGCTTGATCAACAAGGAGGCTTGGGCATGCAATTTGATACCATTACTGGGTACAAAGCATTTTTCTTTAAGAAAAGGCAATTTATTTCAGAGCACGTAAAAAGAATGGCATTCCCGCCATTTCGGGCCTCAGTCTATCATTTGGCGCTTCGGCTGGGAACAGTGAAGCAGGGGAAACTCTCTCCGGCAAGAGTTGGCTTCACAGCGAATATGCAAGTTGTTCGATCTCACGTCCATCAGAGTATCTCCACTAACGATCCTGTTAACACCCTTCCACTCTATCGTTCTGCGCCACCGCTTGAAGTCAGGCTCGAGGATTTCGAGCTATACGCCATGCATCGTCTTCGAGGGGGACTTGAAACTATTAACACTCTATATGGTGAAACTGGATGCAATTTAGCGTGTATACATCGGGCATCTCTCACATTTTCAACACATTCACTGGCATCGGATGTCACAATTGAAACAAGGGCAATCATGGCAGAATTTGACCTTCCTTACAAGGCCGTTAGCCATGTGGAATTTGAGAGTGTGACGGACAAATTGGAACAAGTTGCACGGTCCATTGGCCTGCCTCTGCGTGACAATGACGCTATATTCTACAAGGTACCATTTGAAGAAGTTCCAGAGCTTGTGGCTGGTCGGAAAGTATTTATAAATCAAGGTTATGCTTATGTTGGAATGAATCAGGTTGTCTCATTGGTAGCCACACTATTCCGGAGTCAGCTACCCAAGATTGTGGAAGCCCTGTGCTCAAGTTATCTAGGCCCTGACTATTCTCAGCCAAGAGAGTATGCTCAGATATCATTAAAGGGCATTGATCAAGTTGCTAAGAGCTCATTTCCATTGTGCATGCGTCATCTATTTGAAAAGCTGAGAGAGGATCACCATTTAAAGCATGGAGGGAGGATGCAACTAGGTCTCTTTCTGAAGGTTGCATTGCCTAACTCTCTGAGTTTGATGGGTGTTGGTTTGAATCTAGATGAGGCACTTGCATTTTGGAGACATGAATTCACTCAAAAGGTTGGTCTGGAGAGGTTTGAGAAAGAGTATGCATACAGCATACGCCATAATTATGGGAAGGAAGGGAAGGGAACTGTTATTTCATCAACTCCTGGTGTTGGAGATCATCATGGATGCCCCTATCGACACTTCAGAGCTGCACTTAACAGAATGGGGGTGAATGGTCGAGCAATTGAAGACGTAATGGACAAAGTAAGAAATAGACATTATCAGCTGGCTTGCACCCTGACTTTTGAAGCTATTCATGGCAAGCAATGTGATGCGGGGATTAACCATCCAAATCAATACTTCAGTGACAGCCAAAAGATATTGAAGCCTAAGGTTTATGGATACGCAAGATCCTCCGAGCGCATCCTGATTTACGGCTTCCCTGACTTGAGGCGTTGA 1515 0.4528 MRHSGINAMKAIAILSLSTPRPPFSSLLPLFYFKAGLDQQGGLGMQFDTITGYKAFFFKKRQFISEHVKRMAFPPFRASVYHLALRLGTVKQGKLSPARVGFTANMQVVRSHVHQSISTNDPVNTLPLYRSAPPLEVRLEDFELYAMHRLRGGLETINTLYGETGCNLACIHRASLTFSTHSLASDVTIETRAIMAEFDLPYKAVSHVEFESVTDKLEQVARSIGLPLRDNDAIFYKVPFEEVPELVAGRKVFINQGYAYVGMNQVVSLVATLFRSQLPKIVEALCSSYLGPDYSQPREYAQISLKGIDQVAKSSFPLCMRHLFEKLREDHHLKHGGRMQLGLFLKVALPNSLSLMGVGLNLDEALAFWRHEFTQKVGLERFEKEYAYSIRHNYGKEGKGTVISSTPGVGDHHGCPYRHFRAALNRMGVNGRAIEDVMDKVRNRHYQLACTLTFEAIHGKQCDAGINHPNQYFSDSQKILKPKVYGYARSSERILIYGFPDLRR 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1155 504 Pfam Eukaryotic and archaeal DNA primase, large subunit 276 473 IPR007238 GO:0006269
Lele54g1155 504 Gene3D - 179 291 - -
Lele54g1155 504 CDD PriL_PriS_Eukaryotic 128 476 IPR016558 -
Lele54g1155 504 PANTHER DNA PRIMASE LARGE SUBUNIT 183 483 IPR007238 GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1155 Lele-ChrLele54 17272329 17283637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1155 106 484 Core DNA Replication Machinery Family AT1G67320 49.296 1.96e-144 422