Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1153 ATGAGATCTCAGCTAGACGTTGTGAAGAAGGGGTGTTCACATTGTTGTTGCCACCCCTGGGAGGATAAAGGATATGTTAGCAAAGGAAAAATGAATCTTGATAATTGCAGGTATTTAATTTTAGATGAGGCTGGTAGATTGGTAGATTTGGGATTTGAAGATGACATTAGAGAATTGTTTGATCACTTCAAAGCTCAAAGGCAGACGCTCTTATTTTCTGCCACTATGCCAACCAAAATTCTAAATTTTGCTAGAAGTGCTCTGGTGAAACCAGTCATTGTCAATGTGGGGCGAGCAGGCGCAGCAAATCTTGATGTAATACAGGAGGTAGAGTATGATACGCAAGAGGCAAAAATAGGGTATCTCCTTGAGTGCCTGCAAAAGTCCCCACCTCCAGTTTTAATATTCTGTGAGAACAAGGCTGATGTGGATGACATTCATGAATATTTTCTCTTGAAAGGAGTGGAAGCAGTGGCTATTCATGGAGGCAAAGATCAGGAAGAGAGAGAGAGTATGCAATTGCAGCCTTTAAGGCTGGAAAGAAAGATGTGTTGGTTGCAACTGATGTTGAGATTGGATTTTCCTGATTTTCAGCATACAACCTTACTTGACTTGAAACATCTGTTGCAAGAAGCAAAACAGCGCATTCCTCCAGTTTTAGCAGAGCTTAATGATCCAATGGAGTATACCGAGGAAATCACAGATAAAAGTGAGGTCAATGGGCTTGGTCATCGCATTCGTGACTGCCCCAAATTAGAACATCAGAAGAGCATGGCAATTGCAAATAGCAGAAGGGATTATTTTGGCTCTGGTGGATACAGAGGAGGAATATGA 834 0.4161 MRSQLDVVKKGCSHCCCHPWEDKGYVSKGKMNLDNCRYLILDEAGRLVDLGFEDDIRELFDHFKAQRQTLLFSATMPTKILNFARSALVKPVIVNVGRAGAANLDVIQEVEYDTQEAKIGYLLECLQKSPPPVLIFCENKADVDDIHEYFLLKGVEAVAIHGGKDQEERESMQLQPLRLERKMCWLQLMLRLDFPDFQHTTLLDLKHLLQEAKQRIPPVLAELNDPMEYTEEITDKSEVNGLGHRIRDCPKLEHQKSMAIANSRRDYFGSGGYRGGI 277
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1153 277 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 94 IPR014001 -
Lele54g1153 277 Gene3D - 1 98 IPR027417 -
Lele54g1153 277 Gene3D - 104 183 IPR027417 -
Lele54g1153 277 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 25 171 - -
Lele54g1153 277 Pfam DEAD/DEAH box helicase 2 79 IPR011545 GO:0003676|GO:0005524
Lele54g1153 277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 172 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele54g1153 Lele-ChrLele54 17267486 17268432 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1153 1 170 Eukaryotic Initiation Factors Gene Family AT3G13920 25.434 1.00e-09 57.0